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CAZyme Information: MGYG000001342_00667

You are here: Home > Sequence: MGYG000001342_00667

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus gordonii
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus gordonii
CAZyme ID MGYG000001342_00667
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
582 MGYG000001342_3|CGC1 68140.16 6.4123
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001342 2230611 Isolate not provided not provided
Gene Location Start: 170496;  End: 172244  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001342_00667.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 576 1 590
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 512 1 501
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEE19593.1 0.0 1 577 1 578
VED67427.1 0.0 1 577 1 578
SQF75473.1 2.18e-316 1 577 1 578
CAD0174269.1 1.79e-315 1 579 1 580
CAD0177986.1 1.79e-315 1 579 1 580

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55470 5.68e-11 16 190 92 264
Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000013 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001342_00667.