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CAZyme Information: MGYG000001343_02383
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acinetobacter junii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter junii | |||||||||||
| CAZyme ID | MGYG000001343_02383 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1092479; End: 1093750 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 40 | 404 | 2.9e-129 | 0.9858757062146892 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 1.77e-160 | 38 | 421 | 2 | 375 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 2.49e-143 | 38 | 422 | 2 | 380 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 7.86e-113 | 40 | 399 | 1 | 353 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 4.09e-100 | 40 | 404 | 8 | 363 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK01021 | lpxB | 3.88e-52 | 42 | 394 | 231 | 578 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWA48010.1 | 5.12e-304 | 2 | 423 | 3 | 424 |
| APU48713.1 | 5.75e-303 | 1 | 423 | 1 | 423 |
| ATU45493.1 | 5.75e-303 | 1 | 423 | 1 | 423 |
| QXR09485.1 | 8.74e-281 | 33 | 423 | 1 | 391 |
| QXR29251.1 | 8.74e-281 | 33 | 423 | 1 | 391 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 3.54e-92 | 35 | 418 | 4 | 378 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 3.54e-92 | 35 | 418 | 4 | 378 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6FA07 | 2.75e-217 | 36 | 421 | 10 | 395 | Lipid-A-disaccharide synthase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=lpxB PE=3 SV=1 |
| A1SYV0 | 1.09e-104 | 34 | 423 | 1 | 379 | Lipid-A-disaccharide synthase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lpxB PE=3 SV=1 |
| Q2SBR1 | 5.09e-101 | 35 | 417 | 6 | 378 | Lipid-A-disaccharide synthase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=lpxB PE=3 SV=1 |
| A3QG90 | 1.31e-100 | 42 | 423 | 11 | 381 | Lipid-A-disaccharide synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=lpxB PE=3 SV=1 |
| A8GID3 | 2.62e-100 | 36 | 418 | 4 | 377 | Lipid-A-disaccharide synthase OS=Serratia proteamaculans (strain 568) OX=399741 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000062 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |