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CAZyme Information: MGYG000001343_02719
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acinetobacter junii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter junii | |||||||||||
| CAZyme ID | MGYG000001343_02719 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1459539; End: 1462877 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02675 | tape_meas_nterm | 5.12e-21 | 151 | 225 | 1 | 75 | tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length. |
| COG5281 | COG5281 | 1.55e-10 | 137 | 687 | 1 | 543 | Phage-related minor tail protein [Mobilome: prophages, transposons]. |
| pfam17380 | DUF5401 | 2.92e-06 | 661 | 921 | 287 | 515 | Family of unknown function (DUF5401). This is a family of unknown function found in Chromadorea. |
| TIGR02168 | SMC_prok_B | 5.53e-06 | 603 | 992 | 210 | 564 | chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] |
| PTZ00121 | PTZ00121 | 5.65e-05 | 436 | 858 | 1300 | 1745 | MAEBL; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCR90548.1 | 1.16e-173 | 26 | 1055 | 16 | 1246 |
| QJH21868.1 | 1.16e-173 | 26 | 1055 | 16 | 1246 |
| ARG33852.1 | 1.16e-173 | 26 | 1055 | 16 | 1246 |
| AIL78174.1 | 4.29e-147 | 58 | 1055 | 48 | 1263 |
| QPF41852.1 | 1.02e-143 | 26 | 1074 | 16 | 1233 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P85501 | 1.60e-08 | 945 | 1068 | 731 | 861 | Tape measure protein OS=Pseudomonas phage PAJU2 OX=504346 GN=18 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999899 | 0.000111 | 0.000008 | 0.000001 | 0.000000 | 0.000003 |