logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001345_01363

You are here: Home > Sequence: MGYG000001345_01363

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides xylanisolvens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides xylanisolvens
CAZyme ID MGYG000001345_01363
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
848 MGYG000001345_33|CGC1 96364.86 6.0869
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001345 5913018 Isolate not provided not provided
Gene Location Start: 75289;  End: 77835  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001345_01363.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 508 662 1.7e-52 0.9701492537313433

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 1.30e-81 47 478 6 475
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 8.26e-06 516 675 24 163
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT32653.1 0.0 1 848 1 848
QRM98740.1 0.0 1 848 1 848
QGT73302.1 0.0 1 848 1 848
QNL40851.1 0.0 1 848 1 848
QDM11441.1 0.0 1 848 1 848

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 4.70e-110 61 840 64 864
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 2.60e-107 61 840 64 864
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 8.53e-32 76 676 50 661
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 1.41e-30 76 676 50 661
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000367 0.309757 0.689459 0.000138 0.000146 0.000128

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001345_01363.