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CAZyme Information: MGYG000001346_01006

You are here: Home > Sequence: MGYG000001346_01006

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides uniformis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides uniformis
CAZyme ID MGYG000001346_01006
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 MGYG000001346_13|CGC10 55646.16 6.9389
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001346 4452540 Isolate not provided not provided
Gene Location Start: 536342;  End: 537850  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001346_01006.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 177 476 6.2e-40 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.36e-14 175 310 194 339
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 3.01e-08 157 310 103 259
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.21e-07 180 477 45 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 0.005 188 284 145 253
Probable polygalacturonase
PLN03010 PLN03010 0.007 188 308 141 248
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU00188.1 0.0 1 502 1 502
ALJ62044.1 2.12e-304 1 497 5 502
QUT92206.1 2.12e-304 1 497 5 502
QUT34111.1 3.62e-302 1 399 1 399
AND18155.1 4.12e-278 1 497 1 498

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.048380 0.942220 0.008442 0.000384 0.000273 0.000274

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001346_01006.