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CAZyme Information: MGYG000001351_00232

You are here: Home > Sequence: MGYG000001351_00232

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Edwardsiella tarda
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Edwardsiella; Edwardsiella tarda
CAZyme ID MGYG000001351_00232
CAZy Family GT2
CAZyme Description Cellulose synthase catalytic subunit [UDP-forming]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
856 MGYG000001351_79|CGC2 96989.6 9.5083
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001351 3631674 Isolate not provided not provided
Gene Location Start: 196770;  End: 199340  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT2 269 439 1.1e-34 0.9882352941176471

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR03030 CelA 0.0 136 826 1 711
cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
PRK11498 bcsA 0.0 20 856 7 849
cellulose synthase catalytic subunit; Provisional
cd06421 CESA_CelA_like 9.06e-121 266 498 1 234
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
COG1215 BcsA 1.27e-61 215 675 1 427
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].
cd06435 CESA_NdvC_like 8.31e-30 270 499 2 233
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATI64326.1 0.0 1 856 1 856
AKH87719.1 0.0 1 856 1 856
QPR28583.1 0.0 1 856 1 856
AOV95574.1 0.0 1 856 1 856
AOP44546.1 0.0 1 856 1 855

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7LBY_A 0.0 8 856 8 862
ChainA, Cellulose synthase catalytic subunit [UDP-forming] [Escherichia coli K-12]
5EJ1_A 1.61e-104 205 700 67 579
ChainA, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1]
4HG6_A 9.27e-104 205 700 79 591
ChainA, Cellulose Synthase Subunit A [Cereibacter sphaeroides]
4P00_A 9.48e-104 205 700 80 592
ChainA, Cellulose Synthase A subunit [Cereibacter sphaeroides 2.4.1],4P02_A Chain A, Cellulose Synthase subunit A [Cereibacter sphaeroides 2.4.1],5EIY_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1],5EJZ_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q93IN2 0.0 20 853 20 859
Cellulose synthase catalytic subunit [UDP-forming] OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bcsA PE=3 SV=1
Q8Z291 0.0 20 853 20 859
Cellulose synthase catalytic subunit [UDP-forming] OS=Salmonella typhi OX=90370 GN=bcsA PE=3 SV=1
P37653 0.0 8 856 8 862
Cellulose synthase catalytic subunit [UDP-forming] OS=Escherichia coli (strain K12) OX=83333 GN=bcsA PE=1 SV=3
Q8X5L7 0.0 8 856 8 862
Cellulose synthase catalytic subunit [UDP-forming] OS=Escherichia coli O157:H7 OX=83334 GN=bcsA PE=3 SV=2
P58931 2.61e-252 137 831 30 728
Cellulose synthase catalytic subunit [UDP-forming] OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=bcsA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998546 0.001389 0.000050 0.000004 0.000002 0.000022

TMHMM  Annotations      download full data without filtering help

start end
28 50
82 104
144 166
186 208
221 243
538 560
626 648
663 685