dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000001351_01106

You are here: Home > Sequence: MGYG000001351_01106

Basic Information help

Species

Edwardsiella tarda

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Edwardsiella; Edwardsiella tarda

CAZyme ID

MGYG000001351_01106

CAZy Family

GT2

CAZyme Description

Glucans biosynthesis glucosyltransferase H

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
851		96353.98	9.0786

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001351	3631674	Isolate	not provided	not provided

Gene Location

Start: 553810; End: 556365 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001351_01106.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT2	257	439	8.6e-24	0.9764705882352941

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG2943	MdoH	0.0	65	841	1	734	Membrane glycosyltransferase [Cell wall/membrane/envelope biogenesis, Carbohydrate transport and metabolism].
PRK05454	PRK05454	0.0	84	727	2	599	glucans biosynthesis glucosyltransferase MdoH.
cd04191	Glucan_BSP_MdoH	6.25e-151	255	508	1	254	Glucan_BSP_MdoH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein MdoH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
pfam13632	Glyco_trans_2_3	5.52e-13	352	544	1	187	Glycosyl transferase family group 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.
pfam00535	Glycos_transf_2	1.67e-12	258	437	3	164	Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
ATI63235.1	1	851	1	851
AKH89595.1	1	851	1	851
AOV97420.1	1	851	1	851
QPR26640.1	1	851	1	851
AGH73228.1	1	848	1	848

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	Query Start	Query End	Hit Start	Hit End	Description
Q3KJD8	25	846	11	837	Glucans biosynthesis glucosyltransferase H OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=opgH PE=3 SV=1
Q82SA8	54	843	44	832	Glucans biosynthesis glucosyltransferase H OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=opgH PE=3 SV=1
Q6D6A7	1	847	1	851	Glucans biosynthesis glucosyltransferase H OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=mdoH PE=3 SV=1
Q4KJM5	21	850	7	842	Glucans biosynthesis glucosyltransferase H OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=opgH PE=3 SV=1
Q88D04	25	829	11	820	Glucans biosynthesis glucosyltransferase H OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=opgH PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000004	0.000030	0.000001	0.000000	0.000000	0.000000

TMHMM Annotations download full data without filtering help

start	end
149	166
199	221
523	545
579	601
614	636
691	713