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CAZyme Information: MGYG000001352_01345
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium_AQ sp000165065 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Clostridium_AQ; Clostridium_AQ sp000165065 | |||||||||||
| CAZyme ID | MGYG000001352_01345 | |||||||||||
| CAZy Family | GT51 | |||||||||||
| CAZyme Description | Holliday junction resolvase RecU | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 370516; End: 374469 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT51 | 483 | 677 | 4.6e-54 | 0.9774011299435028 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG0744 | MrcB | 7.47e-120 | 425 | 1039 | 11 | 572 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
| TIGR02074 | PBP_1a_fam | 3.35e-117 | 493 | 1039 | 2 | 502 | penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
| PRK02234 | recU | 7.64e-90 | 1 | 190 | 1 | 194 | Holliday junction-specific endonuclease; Reviewed |
| COG5009 | MrcA | 1.13e-86 | 428 | 1039 | 3 | 692 | Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]. |
| pfam03838 | RecU | 1.23e-78 | 24 | 186 | 1 | 162 | Recombination protein U. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QSI26126.1 | 0.0 | 196 | 1317 | 1 | 1122 |
| QJA02651.1 | 0.0 | 196 | 1317 | 1 | 1143 |
| ANU69517.1 | 0.0 | 196 | 1317 | 1 | 1187 |
| QQR26596.1 | 0.0 | 196 | 1317 | 1 | 1187 |
| ASU18050.1 | 0.0 | 196 | 1317 | 1 | 1187 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3DWK_A | 4.26e-75 | 473 | 1038 | 7 | 557 | ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL] |
| 2OLU_A | 7.79e-71 | 473 | 1038 | 16 | 566 | StructuralInsight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme [Staphylococcus aureus],2OLV_A Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus],2OLV_B Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus] |
| 2FCO_A | 3.17e-58 | 3 | 190 | 8 | 198 | CrystalStructure of Bacillus stearothermophilus PrfA-Holliday Junction Resolvase [Geobacillus kaustophilus HTA426],2FCO_B Crystal Structure of Bacillus stearothermophilus PrfA-Holliday Junction Resolvase [Geobacillus kaustophilus HTA426] |
| 1Y1O_A | 3.05e-57 | 3 | 190 | 11 | 201 | X-raycrystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus [Geobacillus stearothermophilus],1Y1O_B X-ray crystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus [Geobacillus stearothermophilus],1Y1O_C X-ray crystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus [Geobacillus stearothermophilus],1Y1O_D X-ray crystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus [Geobacillus stearothermophilus] |
| 1ZP7_A | 2.38e-50 | 1 | 190 | 1 | 198 | Thestructure of Bacillus subtilis RecU Holliday junction resolvase and its role in substrate selection and sequence specific cleavage. [Bacillus subtilis],1ZP7_B The structure of Bacillus subtilis RecU Holliday junction resolvase and its role in substrate selection and sequence specific cleavage. [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39793 | 6.66e-82 | 418 | 1052 | 17 | 628 | Penicillin-binding protein 1A/1B OS=Bacillus subtilis (strain 168) OX=224308 GN=ponA PE=1 SV=1 |
| Q04707 | 1.85e-70 | 419 | 1040 | 2 | 601 | Penicillin-binding protein 1A OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=ponA PE=1 SV=2 |
| Q8DR59 | 4.58e-70 | 419 | 1040 | 2 | 601 | Penicillin-binding protein 1A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=pbpA PE=1 SV=1 |
| A7GHV1 | 8.83e-70 | 416 | 1040 | 3 | 620 | Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=pbpA PE=3 SV=1 |
| A7FY32 | 1.25e-69 | 416 | 1040 | 3 | 620 | Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=pbpA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000064 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
