logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001362_00739

You are here: Home > Sequence: MGYG000001362_00739

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus anginosus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus
CAZyme ID MGYG000001362_00739
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
587 MGYG000001362_1|CGC8 69181.12 7.1337
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001362 1815545 Isolate not provided not provided
Gene Location Start: 726859;  End: 728622  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001362_00739.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 578 1 586
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 518 1 501
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQF25488.1 3.70e-295 1 586 1 581
QBS00320.1 1.06e-294 1 586 1 581
QBS00422.1 1.06e-294 1 586 1 581
QAU29220.1 1.50e-294 1 586 1 581
QBS00150.1 1.50e-294 1 586 1 581

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C7J1 1.65e-11 270 511 423 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1
B0RVK2 2.17e-11 270 511 423 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000077 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001362_00739.