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CAZyme Information: MGYG000001364_02261

You are here: Home > Sequence: MGYG000001364_02261

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola plebeius
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola plebeius
CAZyme ID MGYG000001364_02261
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
511 MGYG000001364_9|CGC4 56850.33 6.5006
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001364 4421324 Isolate not provided Asia
Gene Location Start: 146207;  End: 147742  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001364_02261.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 51 400 5.5e-65 0.9138461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.87e-67 15 484 74 519
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 7.32e-12 1 297 1 266
Probable polygalacturonase At3g15720
PLN03010 PLN03010 2.16e-11 13 327 36 316
polygalacturonase
pfam00295 Glyco_hydro_28 6.11e-11 57 348 8 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 8.26e-10 18 327 67 351
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37829.1 1.04e-288 1 511 1 512
SOE23384.1 2.11e-200 23 492 31 504
QDW21015.1 1.21e-198 2 500 3 489
AWK06672.1 4.89e-198 1 511 1 500
QGK73231.1 1.31e-195 1 484 1 474

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MXN_A 1.87e-30 23 238 21 217
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
5OLP_A 1.79e-28 23 367 44 411
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 2.21e-23 23 348 27 381
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 6.11e-17 25 393 158 602
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
5LW3_A 4.14e-07 23 89 2 68
Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 5.40e-22 21 348 60 356
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 1.73e-14 25 395 153 578
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P58598 1.17e-09 18 349 49 421
Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pglA PE=3 SV=1
Q9LW07 1.34e-09 1 297 1 266
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P20041 3.59e-09 34 349 63 419
Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002303 0.818232 0.178505 0.000361 0.000292 0.000282

TMHMM  Annotations      download full data without filtering help

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