You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001370_01423
You are here: Home > Sequence: MGYG000001370_01423
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides fluxus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fluxus | |||||||||||
| CAZyme ID | MGYG000001370_01423 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 9814; End: 11112 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 72 | 414 | 2.3e-62 | 0.9292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 8.73e-46 | 49 | 376 | 85 | 431 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 6.36e-21 | 131 | 343 | 42 | 240 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 1.84e-14 | 37 | 321 | 14 | 268 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 2.31e-12 | 52 | 343 | 42 | 311 | polygalacturonase/glycoside hydrolase family protein |
| PLN03010 | PLN03010 | 1.86e-11 | 44 | 300 | 44 | 258 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT77520.1 | 3.06e-275 | 1 | 430 | 1 | 430 |
| QDO69594.1 | 1.03e-273 | 1 | 431 | 1 | 431 |
| ALJ61789.1 | 6.96e-272 | 1 | 431 | 1 | 431 |
| QUT92652.1 | 5.71e-271 | 1 | 431 | 1 | 431 |
| QJR62619.1 | 7.27e-263 | 1 | 432 | 1 | 432 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 3.92e-33 | 47 | 376 | 45 | 386 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 5.06e-25 | 49 | 341 | 30 | 345 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 5.11e-10 | 49 | 272 | 159 | 417 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 1.57e-24 | 49 | 265 | 65 | 279 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P35338 | 4.20e-17 | 44 | 383 | 38 | 348 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
| P26216 | 7.58e-17 | 44 | 383 | 38 | 348 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
| P35339 | 1.37e-16 | 44 | 341 | 38 | 315 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
| P43212 | 6.74e-16 | 47 | 300 | 59 | 284 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000355 | 0.998944 | 0.000211 | 0.000162 | 0.000167 | 0.000148 |