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CAZyme Information: MGYG000001370_01808

You are here: Home > Sequence: MGYG000001370_01808

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides fluxus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fluxus
CAZyme ID MGYG000001370_01808
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
510 MGYG000001370_32|CGC1 55961.67 4.9883
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001370 4330086 Isolate not provided not provided
Gene Location Start: 8293;  End: 9825  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001370_01808.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 91 275 1.2e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.33e-09 85 275 3 186
Amb_all domain.
COG3866 PelB 4.91e-06 9 275 1 273
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 1.59e-05 126 254 55 190
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT93111.1 4.55e-294 17 507 13 512
ALJ61309.1 4.33e-293 17 507 17 516
QDO69223.1 1.07e-292 36 507 41 512
QUT77823.1 4.38e-265 37 506 50 515
QUT75603.1 5.91e-259 32 506 9 485

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.99e-47 38 510 20 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 6.24e-46 38 510 20 415
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 2.22e-45 38 510 20 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 1.15e-43 38 510 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.21e-43 38 510 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.009281 0.988995 0.000984 0.000240 0.000223 0.000241

TMHMM  Annotations      download full data without filtering help

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