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CAZyme Information: MGYG000001371_06168

You are here: Home > Sequence: MGYG000001371_06168

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus lautus_A
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus lautus_A
CAZyme ID MGYG000001371_06168
CAZy Family CBM70
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1468 MGYG000001371_177|CGC2 161424.88 4.5894
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001371 6950059 Isolate not provided not provided
Gene Location Start: 75410;  End: 79816  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001371_06168.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 819 994 5.5e-53 0.9664804469273743
CBM70 37 193 1.8e-40 0.9565217391304348
CBM32 1177 1291 3.3e-20 0.9032258064516129

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.02e-14 1174 1292 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam17963 Big_9 2.80e-14 364 448 5 90
Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.
COG5492 YjdB 3.02e-10 196 334 180 317
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02018 CBM_4_9 8.91e-10 37 185 3 134
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam07940 Hepar_II_III 4.96e-09 833 1000 40 199
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACX64738.1 0.0 1 1468 1 1470
QOT12851.1 0.0 1 1468 1 1470
AYB44936.1 0.0 1 1468 1 1468
ANY74958.1 0.0 37 1295 40 1305
ALS27107.1 4.30e-278 37 1347 262 1568

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D29_A 4.50e-28 1167 1295 6 132
CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2]
5XNR_A 1.29e-25 1167 1295 6 132
TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2]
5ZU6_A 2.36e-21 1175 1290 35 152
ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio]
5ZU5_A 4.48e-19 1175 1290 35 152
Crystalstructure of a full length alginate lyase with CBM domain [Vibrio splendidus]
2JD9_A 3.89e-14 1171 1303 9 142
Structureof a pectin binding carbohydrate binding module determined in an orthorhombic crystal form. [Yersinia enterocolitica],2JDA_A Structure of a pectin binding carbohydrate binding module determined in an monoclinic crystal form. [Yersinia enterocolitica],2JDA_B Structure of a pectin binding carbohydrate binding module determined in an monoclinic crystal form. [Yersinia enterocolitica]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000244 0.999063 0.000200 0.000177 0.000159 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001371_06168.