CAZyme Information: MGYG000001372_01101

Basic Information

• Species: Paraprevotella xylaniphila
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella xylaniphila
• CAZyme ID: MGYG000001372_01101
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
583		66355.7	9.1552

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001372	3789432	Isolate	not provided	not provided

• Gene Location: Start: 6143; End: 7894 Strand: -

Full Sequence      

MAHWKRFIYVIIALFSLQLTARAQETETFVHTIKQGETVYSIARTYQVSPESILKLNPTA
STGIKAGGTLTIPQQQNGTQEKRFHTIQAGETLYKLTKTYQVSADDICKANPGLTAENFK
AGMVIRIPASTMPVNIAPAKETAQPQGVAQSGCREMHKVKRKETLYSIAQNFNLTEAELK
AANPEMNEPGYKLRKGDFVCIPFPKPEKPKEVIPTNEELMGKKTVSAPQKKISLGVILPF
KGGTPENEKMIEFYRGVLMAVENMKRSGTSVDIFAYDSGKSPGDIQAIVNNHPLNHLDFI
IGPLYPEQIAPLSKFCQHHHIKLVVPFSSLGDNVYENPYYYAINPPKSYQFAEAARLTTE
LFGKENVIFLEGTENDKDAAAFVDATRKRLQQNGSKANHLRLNDDEIKWMEAMTQYKDNV
IIPNSSSIKLLNQLFPKLKEFTKKNPEYRIKLVGYPEWQTYANNHLENFYQFNTYVYSSF
FRNPLNGNADEFENAYQKAFHTPTLVSWPRFGMLGFDTAIYFLKGISTYGEAFDQHLSQI
VTTTYQHRFDFQRISNWSGFINREIEFIHYSPSHSIELIRLKK

Enzyme Prediction     

No EC number prediction in MGYG000001372_01101.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00118	LysM	3.32e-09	83	127	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
pfam01476	LysM	8.72e-09	31	73	1	43	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
cd00118	LysM	3.03e-08	30	72	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	9.21e-08	31	72	2	44	Lysin motif.
cd00118	LysM	1.47e-07	157	194	3	44	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALA74972.1	1.58e-158	6	581	5	599
QJR68229.1	2.23e-158	6	581	5	599
QJR60047.1	2.23e-158	6	581	5	599
AII69224.1	2.23e-158	6	581	5	599
QJR72564.1	2.23e-158	6	581	5	599

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P54421	4.07e-06	33	183	30	177	Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000237	0.999079	0.000198	0.000150	0.000149	0.000139

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001372_01101.