CAZyme Information: MGYG000001372_01559

Basic Information

• Species: Paraprevotella xylaniphila
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella xylaniphila
• CAZyme ID: MGYG000001372_01559
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1295		147808.24	5.7346

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001372	3789432	Isolate	not provided	not provided

• Gene Location: Start: 67875; End: 71762 Strand: -

Full Sequence      

MKSSSHSPRIDCFLPCGTENQMAGLVQELRSSGWTGRIYGLCPVGVEATLPDTCLPLHTD
GIFSTQAMLDMARLCEAEYCLFYHKALPLELGFHALDRLLRVADDTRADLLYADHYAIQD
GARHAHPLIDYQKGSLRDDFDFGPLVLIRTEGLKAYAGQENLPDYRFAGWYDLRLYLSRH
GKLFHLDEPLYTKTETDTRKSGEKNFDYVDPKNRTVQIEMEKACTEHLKQIGAYLAPDEF
DEVDFRAEDFPCEATVVIPVRNRVRTIEDAIRSVLSQETDFDFNLIVADNHSTDGTTEAI
ARYATRDPRVVHLIPERGDLGIGGCWNLAVHHPRCGRFVVQLDSDDLYSSPQTLQRIIQT
FYHEKAAMVIGAYRMTDFSLQTLPPGLIDHKEWTPENGRNNALRINGLGAPRAFFTPILR
KLQIPNTSYGEDYALGLCFSRYYRIGRIYEELYLCRRWEGNSDAALSIEKANAHNLYKDR
LRTIEIEARRRLNRLWAHPLNPEEMQAFFRKQLEDWSEARQRYEDLQKAENKELAIGDHT
LTAQFNPARIASTGANISAEALAARPCFLCDLNRPEVQHALPIEGHYQLLVNPYPILPEH
FTIPARRHTPQSILPHFKTLRNMAWNIPEAVFFYNGPVCGASAPDHMHFQAGKRGVLPIE
RDWKSYEMGMEKLYPLQPDEEESIEEIMMQNANCGLYILKSYICPVFVIRTRPSEHPCLL
FEKLYYALPLCDGENEPRMNIICWRQSWNAGREDEIVILIFPRKKHRPACYGQTGEHQLL
VSPGALDMGGLFITPREKDFRAITAELATDILREVTLSEEELKPVIGQFTRHQKKDGTEN
AEPRTAPERLHEGTEPEVSVGIMSRQRIHFSLNATYSAKGSLVRGEQTVECSEGGILWNG
NLYRELTFTPQENKASFSLYDVTIGIKFHWERQETQIFSGTLKLVVEEEKIVAINVLPVE
DYLISVISSEMNASASPEFLKASAVISRSWLYAQIEKRKQLSNHDRGFFSFSKSDGELIR
WYDREDHTIFDVCADDHCQRYQGITRASNEAVVEAVKATRGQILTSGDDICDARFSKCCG
GATEEFEYCWEDKHLSYLTSVRDIAPGNLSGIRPALPDLTREEEAEKWIRSNPPSFCHTE
DEEILRQVLNDYDRETTDFYRWRVEYTQDELSGLIEENLKTDFGSILDLIPVERGRGGHI
SRLRIVGTQETLVIGKELEIRRVLSHTHLFSSAFVVDKEDLHDGIPGRFVLHGAGWGHGV
GLCQIGAAVMGAKGYRYDEILKHYYDGITIRKAYS

Enzyme Prediction     

No EC number prediction in MGYG000001372_01559.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	255	382	8.6e-20	0.7294117647058823

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16269	DUF4922	8.69e-98	616	823	1	188	Domain of unknown function (DUF4922). This family consists of uncharacterized proteins around 310 residues in length and is mainly found in various Bacteroides and Parabacteroides species. Several members are annotated as putative glycosyltransferases, but the specific function of this family is still unknown.
TIGR02669	SpoIID_LytB	6.04e-45	953	1290	2	265	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
COG2385	SpoIID	3.17e-37	909	1291	98	391	Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].
TIGR02870	spore_II_D	9.22e-32	940	1293	48	338	stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination]
pfam08486	SpoIID	2.71e-31	947	1065	1	100	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QYR11045.1	0.0	9	1295	3	1246
QNT65264.1	0.0	9	1295	4	1260
BCS84357.1	0.0	9	1295	4	1253
QFQ11638.1	0.0	30	1295	9	1262
QUB41125.1	0.0	9	1294	6	1243

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5I1T_A	2.12e-08	957	1294	64	330	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
5TXU_A	2.43e-08	957	1294	88	354	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
4RWR_A	5.02e-08	942	1291	51	318	2.1Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis],4RWR_B 2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P07372	9.76e-10	957	1293	75	332	Stage II sporulation protein D OS=Bacillus subtilis (strain 168) OX=224308 GN=spoIID PE=4 SV=1
P13251	1.29e-08	957	1295	76	335	Stage II sporulation protein D OS=Bacillus amyloliquefaciens OX=1390 GN=spoIID PE=4 SV=1
C0QYX7	2.50e-07	938	1290	88	351	Uncharacterized protein BHWA1_00569 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=BHWA1_00569 PE=1 SV=1
Q02113	9.10e-06	966	1290	425	702	Amidase enhancer OS=Bacillus subtilis (strain 168) OX=224308 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000051	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001372_01559.