logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001375_00717

You are here: Home > Sequence: MGYG000001375_00717

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_F champanellensis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_F; Ruminococcus_F champanellensis
CAZyme ID MGYG000001375_00717
CAZy Family CBM4
CAZyme Description Cellulose 1,4-beta-cellobiosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
916 MGYG000001375_1|CGC8 98576.9 4.4587
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001375 2513436 Isolate not provided not provided
Gene Location Start: 804176;  End: 806926  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.78

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 303 788 1.4e-116 0.9952153110047847
CBM4 34 175 3.1e-27 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 1.34e-83 305 786 1 373
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 9.10e-27 213 297 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 5.58e-23 211 292 1 83
Cellulase N-terminal ig-like domain.
PLN02909 PLN02909 5.33e-10 363 740 77 427
Endoglucanase
PLN03009 PLN03009 1.00e-09 303 716 29 414
cellulase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21576.1 0.0 6 794 7 803
CBL17684.1 4.12e-265 2 794 4 862
QNU67291.1 3.24e-260 29 794 38 792
CUH93326.1 2.70e-256 29 793 42 793
QTL97152.1 2.28e-255 31 793 38 805

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UT9_A 1.14e-164 212 792 6 606
ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]
1RQ5_A 2.35e-164 212 793 6 607
ChainA, Cellobiohydrolase [Acetivibrio thermocellus]
6DHT_A 7.68e-67 213 794 18 568
Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483]
3X17_A 9.23e-64 211 792 16 558
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
1CLC_A 3.04e-62 175 788 8 559
ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DCH1 2.39e-196 26 792 35 813
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
P0C2S1 6.72e-196 26 792 35 813
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1
Q05156 2.41e-146 6 793 2 745
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1
P14090 2.27e-141 34 793 185 910
Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2
P10476 8.27e-131 216 794 40 602
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004863 0.959483 0.009825 0.025088 0.000417 0.000285

TMHMM  Annotations      download full data without filtering help

start end
7 29
853 875