Species | Ruminococcus_F champanellensis | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_F; Ruminococcus_F champanellensis | |||||||||||
CAZyme ID | MGYG000001375_01375 | |||||||||||
CAZy Family | PL1 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 1552887; End: 1555436 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
PL1 | 90 | 269 | 1.7e-54 | 0.9836065573770492 |
CBM13 | 505 | 644 | 1.7e-21 | 0.6914893617021277 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam14200 | RicinB_lectin_2 | 5.08e-14 | 541 | 630 | 5 | 89 | Ricin-type beta-trefoil lectin domain-like. |
cd14256 | Dockerin_I | 5.23e-14 | 797 | 849 | 2 | 56 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
pfam14200 | RicinB_lectin_2 | 5.28e-14 | 507 | 581 | 15 | 89 | Ricin-type beta-trefoil lectin domain-like. |
pfam00404 | Dockerin_1 | 5.50e-08 | 797 | 849 | 1 | 55 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
pfam14200 | RicinB_lectin_2 | 3.67e-07 | 587 | 644 | 1 | 56 | Ricin-type beta-trefoil lectin domain-like. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CBL17517.1 | 0.0 | 1 | 849 | 1 | 849 |
ADU22445.1 | 6.73e-276 | 1 | 789 | 1 | 728 |
BAV13046.1 | 7.77e-216 | 41 | 490 | 50 | 510 |
ADL50763.1 | 7.77e-216 | 41 | 490 | 50 | 510 |
AUO19292.1 | 2.75e-210 | 23 | 788 | 16 | 644 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
B8NQQ7 | 6.80e-49 | 39 | 481 | 20 | 418 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
Q2UB83 | 1.13e-47 | 39 | 481 | 20 | 418 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
Q5B297 | 5.07e-44 | 39 | 481 | 20 | 415 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
Q4WL88 | 1.08e-42 | 39 | 481 | 21 | 419 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
B0XMA2 | 1.46e-42 | 39 | 481 | 21 | 419 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000901 | 0.993225 | 0.004729 | 0.000657 | 0.000252 | 0.000203 |
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