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CAZyme Information: MGYG000001375_01875

You are here: Home > Sequence: MGYG000001375_01875

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_F champanellensis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_F; Ruminococcus_F champanellensis
CAZyme ID MGYG000001375_01875
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
693 MGYG000001375_1|CGC26 75576.86 5.5725
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001375 2513436 Isolate not provided not provided
Gene Location Start: 2031243;  End: 2033324  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 39 276 5.2e-70 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 8.53e-144 5 658 42 757
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 6.30e-109 7 648 26 729
beta-glucosidase BglX.
COG1472 BglX 1.30e-78 7 407 14 395
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 3.41e-63 345 576 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 7.55e-51 27 306 46 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL17962.1 0.0 1 693 5 697
ADU23372.1 0.0 2 693 1 691
CBL34024.1 0.0 2 689 1 687
AEE64772.1 0.0 2 693 1 691
CCO04977.1 0.0 2 693 1 691

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 1.63e-115 7 660 17 708
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 1.63e-115 7 660 17 708
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5A7M_A 3.05e-103 14 683 51 755
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 3.13e-103 14 683 51 755
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
6Q7I_A 3.38e-103 9 668 46 738
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 2.58e-139 5 685 24 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 5.96e-124 4 576 37 625
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q94KD8 2.87e-116 4 660 43 740
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9LJN4 7.83e-116 5 585 41 637
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
Q9FLG1 2.66e-113 5 578 59 644
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999982 0.000045 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001375_01875.