CAZyme Information: MGYG000001376_00022

Basic Information

• Species: Dysgonomonas gadei
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei
• CAZyme ID: MGYG000001376_00022
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
326		37670.97	6.9734

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001376	5166013	Isolate	not provided	not provided

• Gene Location: Start: 22765; End: 23745 Strand: +

Full Sequence      

MKKYIIYSLSVLILCFLAFFLLSNNSGEEVQSKVPYVLSMTKSVEVPHKVEFAGEELVLD
RYDLHERYDREINGFTYLHSTTLLLIKKANRYFPIIEPILKENGIPEDFKYLAVIESSLD
HRAVSSAGAAGLWQFMPKTAPSYGLEVSSEVDERYSIEKSTEAACRYFKEAYAKYGSWAS
VALSYNAGQGRISTELDKQQAEDSLDLWLVNETTRYYYRMLAIKQIFEDPSKYGFVLTEN
DLYKPIEFTKVEVTQSISDLAGFAKEKGLTYAQLKDFNSWLRDRKLTITSKSRSSYTILL
PTQESLYYKKGEKIKVHDKAWIYRDR

Enzyme Prediction     

No EC number prediction in MGYG000001376_00022.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH23	92	227	1.3e-23	0.9037037037037037

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd16894	MltD-like	8.15e-58	100	225	1	129	Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
PRK10783	mltD	4.85e-28	52	301	65	311	membrane-bound lytic murein transglycosylase D; Provisional
pfam01464	SLT	3.86e-24	95	192	1	99	Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
cd00254	LT-like	1.35e-18	112	222	5	108	lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
cd13401	Slt70-like	8.28e-15	92	217	6	138	70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIK56176.1	4.45e-168	1	322	1	322
QIK58445.1	2.66e-167	1	322	2	323
BBD44537.1	2.20e-149	1	324	1	323
SCM59513.1	1.61e-144	22	322	23	321
CEA15013.1	9.61e-144	1	322	1	322

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P32820	1.47e-09	68	192	2	126	Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1
O31608	9.90e-08	116	192	85	156	Putative murein lytic transglycosylase YjbJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbJ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.959107	0.025635	0.015062	0.000040	0.000032	0.000137

TMHMM  Annotations     

start	end
5	22