logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001376_00415

You are here: Home > Sequence: MGYG000001376_00415

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas gadei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei
CAZyme ID MGYG000001376_00415
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1435 MGYG000001376_1|CGC11 157124.83 5.3212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001376 5166013 Isolate not provided not provided
Gene Location Start: 557212;  End: 561519  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001376_00415.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 1035 1150 1.6e-22 0.8951612903225806
CBM32 898 1014 1.1e-20 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.97e-17 896 1013 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 5.17e-14 1034 1150 2 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam12708 Pectate_lyase_3 1.07e-10 54 121 3 67
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
smart00231 FA58C 5.96e-10 891 1016 10 139
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
pfam12708 Pectate_lyase_3 1.05e-07 481 534 7 61
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHW60575.1 0.0 41 1016 4 969
AEV98037.1 0.0 31 1016 28 1005
QUT90069.1 9.74e-286 34 1082 27 1094
QJD86468.1 5.42e-84 38 794 920 1664
QHW29527.1 3.03e-60 50 815 1097 1955

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5LW3_A 2.12e-06 478 553 5 80
Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q44495 3.92e-06 478 553 5 80
Mannuronan C5-epimerase AlgE2 OS=Azotobacter vinelandii OX=354 GN=algE2 PE=1 SV=1
Q44494 4.24e-06 478 553 5 80
Mannuronan C5-epimerase AlgE1 OS=Azotobacter vinelandii OX=354 GN=algE1 PE=1 SV=1
Q44492 6.73e-06 478 553 5 80
Mannuronan C5-epimerase AlgE5 OS=Azotobacter vinelandii OX=354 GN=algE5 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999867 0.000074 0.000014 0.000001 0.000000 0.000090

TMHMM  Annotations      download full data without filtering help

start end
13 35