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CAZyme Information: MGYG000001376_01376
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Dysgonomonas gadei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei | |||||||||||
| CAZyme ID | MGYG000001376_01376 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 673790; End: 676459 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 105 | 331 | 1.3e-67 | 0.9768518518518519 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 7.68e-180 | 4 | 880 | 1 | 758 | beta-glucosidase BglX. |
| COG1472 | BglX | 1.20e-95 | 44 | 467 | 1 | 396 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| PLN03080 | PLN03080 | 4.14e-89 | 108 | 873 | 78 | 769 | Probable beta-xylosidase; Provisional |
| pfam00933 | Glyco_hydro_3 | 9.17e-73 | 45 | 368 | 1 | 316 | Glycosyl hydrolase family 3 N terminal domain. |
| pfam01915 | Glyco_hydro_3_C | 5.60e-42 | 406 | 770 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANQ52211.1 | 9.27e-293 | 4 | 881 | 1 | 878 |
| QWG04440.1 | 9.27e-293 | 4 | 881 | 1 | 878 |
| BAX80110.1 | 1.89e-281 | 24 | 887 | 2 | 862 |
| AXP81467.1 | 8.61e-258 | 1 | 879 | 1 | 872 |
| QSB28447.1 | 1.63e-256 | 1 | 879 | 6 | 877 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5YOT_A | 5.38e-128 | 22 | 887 | 3 | 756 | Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40] |
| 7EAP_A | 4.08e-127 | 22 | 887 | 3 | 756 | ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40] |
| 5TF0_A | 4.19e-126 | 37 | 882 | 13 | 746 | CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393] |
| 5Z87_A | 8.25e-124 | 26 | 887 | 36 | 785 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 5XXL_A | 1.63e-117 | 37 | 879 | 14 | 744 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q56078 | 6.16e-126 | 37 | 879 | 38 | 757 | Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2 |
| P33363 | 9.74e-124 | 37 | 879 | 38 | 757 | Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2 |
| T2KMH0 | 5.55e-114 | 1 | 888 | 1 | 721 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| T2KMH9 | 8.14e-109 | 26 | 876 | 29 | 744 | Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1 |
| D5EY15 | 5.38e-102 | 13 | 887 | 8 | 861 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000082 | 0.000000 | 0.000000 | 0.000000 |