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CAZyme Information: MGYG000001378_00276

You are here: Home > Sequence: MGYG000001378_00276

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ovatus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
CAZyme ID MGYG000001378_00276
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
541 MGYG000001378_1|CGC9 60723.27 4.7833
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001378 6545242 Isolate not provided not provided
Gene Location Start: 404563;  End: 406188  Strand: -

Full Sequence      Download help

MKHRNLFIGL  SCMAAGLCAC  NDEYTFVPEY  EVKLPTDTTI  NVTIDASTVY  QTIDGFASSD60
AWDMEYVGKY  WSTSNKEAIA  KLLFSREVDE  KGNSQGIGLS  MWRFNLGGGS  EEQGDASGIV120
SDKKERRVDC  FLTSANGSYD  WSKSAGRRYF  MEKAKEYGCE  SFVLFSNTPP  VYYTYNGQAR180
SDKGSSSNLK  TEHYGDFADF  LATCAKHFVD  EGYSISYISP  VNEPQYNWNG  NEQEGSAWQN240
TEVATLAKAL  DASLTAKGLS  NTQMLLAEAG  KWDYLYGNGD  AGSARGNVIE  AFFNPNNTST300
YIGNLTHLPK  LICGHSYYLD  TNWSNMYSVR  SSVKSKADQY  GLKVYQTEWS  MLSENYEDYA360
SYGDASYMDL  ALSMAKVIHQ  DLATANVSSW  SYWTTCSRER  WSQKSRFYLI  RLSPDSNDGE420
SYADLATNGT  YKASKNLWVL  GNYSAFVRPG  YQRVDLKLEE  ETKDFFATAY  ISPEKDKLVV480
VYTNMTDKRA  EINNTFEGLG  KEVGEFEQYT  TSEAKDLKRE  PSYNKGVVPA  KGISTFIYTL540
Q541

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Created with Snap27548110813516218921624327029732435137840543245948651341537GH30
Family Start End Evalue family coverage
GH30 41 537 2.1e-171 0.9958677685950413

CDD Domains      download full data without filtering help

Created with Snap27548110813516218921624327029732435137840543245948651344397Glyco_hydr_30_241541XynC
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 2.20e-122 44 397 6 357
O-Glycosyl hydrolase family 30.
COG5520 XynC 1.70e-07 41 541 35 431
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Created with Snap2754811081351621892162432702973243513784054324594865131541QGT72500.1|GH30_41541QIU93356.1|GH30_417538SCD19763.1|GH30_412517QIK59847.1|GH30_412517QIK54438.1|GH30_4
Hit ID E-Value Query Start Query End Hit Start Hit End
QGT72500.1 0.0 1 541 1 541
QIU93356.1 2.18e-236 1 541 1 530
SCD19763.1 1.90e-177 17 538 15 525
QIK59847.1 1.62e-175 12 517 11 508
QIK54438.1 3.26e-175 12 517 11 508

PDB Hits      download full data without filtering help

Created with Snap275481108135162189216243270297324351378405432459486513445373CLW_A424546M5Z_A424547NCX_AAA424547O0E_A1515374FMV_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 1.30e-74 44 537 10 495
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 5.21e-12 42 454 25 370
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
7NCX_AAA 2.88e-10 42 454 12 366
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7O0E_A 3.56e-10 42 454 5 359
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4FMV_A 3.96e-10 151 537 70 385
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]

Swiss-Prot Hits      download full data without filtering help

Created with Snap27548110813516218921624327029732435137840543245948651330484sp|Q76FP5|6GAL_HYPRU42454sp|G2Q1N4|XY30A_MYCTT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 4.81e-20 30 484 14 409
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
G2Q1N4 3.83e-10 42 454 29 383
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000060 1.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001378_00276.