CAZyme Information: MGYG000001378_02968

Basic Information

• Species: Bacteroides ovatus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
• CAZyme ID: MGYG000001378_02968
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
795	MGYG000001378_6|CGC2	87362.86	4.5904

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001378	6545242	Isolate	not provided	not provided

• Gene Location: Start: 79544; End: 81931 Strand: -

Full Sequence      

MRYFLFILLVGLLSACSSDDESNAGATAAKLEVSKNEVKLSNVDGSFTINVTATSTWTAE
VTSTGDWLTISKSSGEGNGDLRLFFTENTDGPKRTGTVKVSMSGAGSTLEQEISVEQLGA
DPDILFDYSSDPLSFRGGTFTCKVVANVEWELEIAAEYDWIKLKEATPRTRSFVTDEVTF
AVDANANKTRTAVLIFKSVGDYTLQRVLKVTQDGVSGEVTIEQDEYIIPYKCPKLVISAP
QGENPVDYDAVISESWITQDKKNSTANEVVLNIENNETVFPRTATVEMLDKVITIFQYGK
PDTSIGDDHSTSILAFPGAEGGGRFTTGGRGGEIYRVTTLADYNKNETPIEGSLRYGIEK
SNQPRTIIFDVSGIIELKRGLYLNEYPNLSIIGQTAPGDGITLKNYNFTFNLSKDPAIGA
GGSLNAIVRFLRCRPGDQFADYGEDAIGGRYFKDAIIDHITAGWSVDETLTFYGVQNFTA
QWCIASESMNLSNHAKGAHGYGAMFSGDNASFHHILLAHHGSRCPRISDLSAPGTQESYD
FTGYFDVRNNVYYNWSGRGQGSYGGKYATFNLTNCYYKPGPATGTNNRSYRILSSDPTAR
AYINGNYVLGNTSVTADNWTEGVWGQFDSSLGTVPEAEKQAMKMADYQPYSKLTNHTAEQ
AYNRVLEYAGASLRRDVIDQRVVREVKNGTYTYIGSKPEEDGKAKQPGIIDTVSDTEGYI
DVKSLKPWPDTDGDGIPDIWEEAYGLDPNDPSDAQKISSSVDPNGRYPNIEVYFHNLVQH
IIYYQNQGGIVMEKK

Enzyme Prediction     

No EC number prediction in MGYG000001378_02968.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	372	577	2.7e-64	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd14948	BACON	1.19e-17	31	117	2	82	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam19190	BACON_2	1.18e-07	31	109	2	84	Viral BACON domain. This family represents a distinct class of BACON domains found in crAss-like phages, the most common viral family in the human gut, in which they are found in tail fiber genes. This suggests they may play a role in phage-host interactions.
cd14948	BACON	3.32e-07	129	213	5	83	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam13004	BACON	1.31e-05	57	117	1	60	Putative binding domain, N-terminal. The BACON (Bacteroidetes-Associated Carbohydrate-binding Often N-terminal) domain is an all-beta domain found in diverse architectures, principally in combination with carbohydrate-active enzymes and proteases. These architectures suggest a carbohydrate-binding function which is also supported by the nature of BACON's few conserved amino-acids. The phyletic distribution of BACON and other data tentatively suggest that it may frequently function to bind mucin. Further work with the characterized structure of a member of glycoside hydrolase family 5 enzyme, Structure 3ZMR, has found no evidence for carbohydrate-binding for this domain.
pfam18884	TSP3_bac	5.05e-04	730	751	1	22	Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGT73513.1	0.0	1	795	1	795
QNL41094.1	0.0	1	795	1	795
QUT78065.1	0.0	1	795	1	795
ALJ48967.1	0.0	1	795	1	795
SCV08385.1	0.0	1	795	1	795

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q0CLG7	2.42e-39	305	778	11	414	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7	2.06e-38	309	778	15	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2	7.13e-38	311	778	19	415	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q5B297	9.85e-38	310	778	17	411	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q4WL88	1.78e-37	311	778	19	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000051	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001378_02968.