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CAZyme Information: MGYG000001378_02979

You are here: Home > Sequence: MGYG000001378_02979

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ovatus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
CAZyme ID MGYG000001378_02979
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
553 MGYG000001378_6|CGC2 60476.85 5.6508
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001378 6545242 Isolate not provided not provided
Gene Location Start: 99181;  End: 100842  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001378_02979.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 110 304 2.9e-70 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.10e-04 104 304 3 186
Amb_all domain.
COG3866 PelB 0.006 101 269 73 246
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT73502.1 0.0 1 553 1 553
QUT78077.1 0.0 1 553 1 553
QDM11672.1 0.0 1 553 1 553
QRQ55766.1 0.0 1 553 1 553
SCV08374.1 0.0 1 553 1 553

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 3.73e-07 61 276 46 253
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.64e-39 54 538 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.68e-37 54 538 20 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 8.78e-34 54 540 20 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q4WL88 2.21e-33 54 538 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 3.02e-33 54 538 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000032 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001378_02979.