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CAZyme Information: MGYG000001378_02980

You are here: Home > Sequence: MGYG000001378_02980

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ovatus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
CAZyme ID MGYG000001378_02980
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
498 MGYG000001378_6|CGC2 54789.43 6.8122
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001378 6545242 Isolate not provided not provided
Gene Location Start: 100878;  End: 102374  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001378_02980.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 96 284 3.9e-78 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.34e-10 56 294 48 287
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 3.65e-07 98 276 3 175
Amb_all domain.
pfam18884 TSP3_bac 6.81e-05 447 468 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT73501.1 0.0 1 498 1 498
QRQ55765.1 0.0 1 498 1 498
SCV08373.1 0.0 1 498 1 498
ALJ48955.1 0.0 1 498 1 498
QDM11671.1 0.0 1 498 1 498

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0XMA2 4.76e-49 43 495 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q5B297 4.86e-49 43 495 20 415
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 9.02e-49 41 495 18 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q4WL88 1.28e-48 43 495 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 6.69e-48 43 495 21 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000400 0.998692 0.000234 0.000237 0.000223 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001378_02980.