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CAZyme Information: MGYG000001378_03745

You are here: Home > Sequence: MGYG000001378_03745

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ovatus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
CAZyme ID MGYG000001378_03745
CAZy Family GH143
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1106 MGYG000001378_8|CGC5 126926.93 6.1434
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001378 6545242 Isolate not provided not provided
Gene Location Start: 228304;  End: 231624  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001378_03745.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH143 18 567 8.4e-295 0.9946043165467626
GH142 630 1098 1.5e-233 0.9979123173277662

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 4.74e-09 266 340 168 247
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG3408 GDB1 3.49e-05 751 990 343 588
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT69949.1 0.0 1 1106 1 1106
QUR43134.1 0.0 1 1106 1 1106
QUT81781.1 0.0 1 1106 1 1106
QRN01961.1 0.0 1 1106 1 1106
ALJ45260.1 0.0 1 1106 1 1106

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQR_A 0.0 23 1106 25 1108
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQS_A 0.0 23 1106 25 1108
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 2.40e-19 649 1100 303 810
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 1.96e-18 649 1100 334 841
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000227 0.999135 0.000160 0.000163 0.000145 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001378_03745.