CAZyme Information: MGYG000001378_04774

Basic Information

• Species: Bacteroides ovatus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ovatus
• CAZyme ID: MGYG000001378_04774
• CAZy Family: GH51
• CAZyme Description: Intracellular exo-alpha-L-arabinofuranosidase 2

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
514		57903.03	7.4166

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001378	6545242	Isolate	not provided	not provided

• Gene Location: Start: 153020; End: 154564 Strand: +

Full Sequence      

MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVG
ENSDIPNIKGYRTDVFNALKDLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGG
TIEDNSFGTHEFLNLCEMLGCEPYVSGNVGSGTVEELAKWVEYMTSDGDSPMANLRRKNG
RDKAWKLKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNRLFKIASGASDYDYN
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATQFNKDDYYWTMGKCLEVEDVLKKHCA
IMDKYDKNKKIALLLDEWGTWWDEEPGTIKGHLYQQNTLRDAFVASLSLDVFHKYTDRLK
MANIAQIVNVLQSMILTKDKEMVLTPTYYVFKMYKVHQDATYLPIDLTCEKMSVRDNRTV
PMVSATASKNKDGVIHISLSNVDADEAQEITINLGDTKAKKAVGEILTSAKLTDYNSFEN
PNIVKPAPFKEVKINKGTMKVKLPAKSIVTLELQ

Enzyme Prediction     

EC	3.2.1.55

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH51	15	514	4e-143	0.7412698412698413

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3534	AbfA	0.0	21	513	1	498	Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism].
pfam06964	Alpha-L-AF_C	3.39e-78	316	507	1	192	Alpha-L-arabinofuranosidase C-terminal domain. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
smart00813	Alpha-L-AF_C	3.54e-68	316	507	1	189	Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGT69675.1	0.0	1	514	1	514
QNL37243.1	0.0	1	514	1	514
QRQ56547.1	0.0	1	514	1	514
SCV09213.1	0.0	1	514	1	514
ALJ44877.1	0.0	1	514	1	514

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZT6_A	9.96e-209	23	513	4	493	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
2VRQ_A	9.96e-209	23	513	4	493	StructureOf An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_B Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_C Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus]
6ZT8_A	4.03e-208	23	513	4	493	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
6ZTA_A	9.36e-207	23	513	4	493	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
2VRK_A	1.79e-199	23	513	4	493	Structureof a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus],2VRK_B Structure of a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus],2VRK_C Structure of a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q59219	0.0	1	514	1	514	Intracellular exo-alpha-L-arabinofuranosidase OS=Bacteroides ovatus OX=28116 GN=asdII PE=3 SV=1
P94552	5.44e-198	28	514	8	492	Intracellular exo-alpha-L-arabinofuranosidase 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=abf2 PE=1 SV=2
A2QQ94	1.24e-60	18	446	7	443	Probable alpha-L-arabinofuranosidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=abfC PE=3 SV=1
Q0D1I6	8.99e-60	18	449	7	446	Probable alpha-L-arabinofuranosidase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfC PE=3 SV=1
A1CQC3	2.49e-59	18	466	7	456	Probable alpha-L-arabinofuranosidase C OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=abfC PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000341	0.998939	0.000229	0.000180	0.000163	0.000148

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001378_04774.