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CAZyme Information: MGYG000001380_03011

You are here: Home > Sequence: MGYG000001380_03011

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_B gnavus
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B gnavus
CAZyme ID MGYG000001380_03011
CAZy Family GH2
CAZyme Description Beta-galactosidase BoGH2A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
805 MGYG000001380_12|CGC1 90422.36 6.1659
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001380 3437962 Isolate not provided not provided
Gene Location Start: 74781;  End: 77198  Strand: -

Full Sequence      Download help

MRKIAFNDGW  TCRHAGDSGK  GKPVTIPHDA  MLDEKRTQES  LGGINIGWFE  GFDYVYEKEF60
SVPQEYEDFR  LVFEFEGVYR  NAEVYLNGKR  AGFRPYGYTN  FYVEANEFLH  FGMKNQIQVI120
ARNADQPNSR  WYSGAGIYRP  VSLYMLPKKH  IGINGVKIST  VSIHPAVIDV  KVETSASGEL180
ELEIFEGESL  VSGQEPVASV  KKSADGNFQM  QLEIPDAKLW  STEFPFLYTC  RVRFEEDEAE240
EIFGIRTIEW  SAENGFLMNG  ERVILRGACI  HHDNGVLGAC  CYPEAEERKI  RILKENGYNA300
IRSAHNPCSK  ALLDACDRRG  MLVMDEFVDV  WYIHKTEYDY  VNHFAKWWKQ  DLKDMVEKDY360
NHPSVILYST  GNEVSETAQE  RGIRLTGQMT  EYLHSLDATR  PVTCGINIFF  NFLSSIGFGV420
YSDKKAKKEA  SRSGGKKKAV  GSEFFNNLAG  ILGSKTMKIG  ATLHGCDVKT  RDAFANMDIA480
GYNYGIYRYG  KDLKKYPKRL  ILGSETFCSD  AYAFWEMAKI  HPRIIGDFVW  AGMDYMGEVG540
VGAWEYSDYA  PDFSHGAGWI  TAGSGRIDLT  GKPLAEAAYT  KTAFELMEKP  VIAVCPVNHT600
GEKHSPSAWK  MSNAIESWSW  DGCSGKKAQV  EVYARADRVE  LFINGKSVGS  KKMKNDCRTS660
FDVIYEEGII  EAISYDAQNR  EIARNVLYTA  GKETILTGIP  EEKETEAGKL  CFVRLQYTDK720
TGTVKPLKRG  TLEVHVENGE  LLGLGNGCPY  NERGYRTSKT  DTYFGEALAV  VRAGKTGTVD780
LKVSDGKYAC  TLQIPVRNKE  EVEEC805

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Created with Snap40801201612012412813223624024424835235636036446847247643562GH2
Family Start End Evalue family coverage
GH2 3 562 4.1e-102 0.5797872340425532

CDD Domains      download full data without filtering help

Created with Snap408012016120124128132236240244248352356360364468472476446498LacZ53410PRK1015055402ebgA136373lacZ256423Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 8.34e-59 46 498 83 526
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 7.62e-37 53 410 62 452
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.12e-27 55 402 112 472
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 6.50e-23 136 373 208 462
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 7.47e-18 256 423 8 183
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap40801201612012412813223624024424835235636036446847247641805QRT30385.1|GH21805QHB24152.1|GH21805QEI31653.1|GH23788BAM48408.1|GH21786AUJ85302.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QRT30385.1 0.0 1 805 1 805
QHB24152.1 0.0 1 805 1 805
QEI31653.1 0.0 1 805 1 805
BAM48408.1 0.0 3 788 2 776
AUJ85302.1 0.0 1 786 1 773

PDB Hits      download full data without filtering help

Created with Snap408012016120124128132236240244248352356360364468472476417766B6L_A17767RSK_A17847CWD_A27754YPJ_A67895T9A_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B6L_A 1.91e-120 1 776 5 755
Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838]
7RSK_A 7.97e-120 1 776 5 755
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7RSK_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
7CWD_A 1.72e-88 1 784 1 788
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 8.03e-88 2 775 8 784
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5T9A_A 3.84e-83 6 789 32 837
Crystalstructure of BuGH2Cwt [Bacteroides uniformis],5T9A_B Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_C Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_D Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9G_A Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_B Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_C Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_D Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap40801201612012412813223624024424835235636036446847247646794sp|A7LXS9|BGH2A_BACO117773sp|T2KM09|PLH16_FORAG56722sp|T2KPJ7|PLH8_FORAG56401sp|P77989|BGAL_THEP355376sp|Q56307|BGAL_THEMA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXS9 1.37e-88 6 794 47 846
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KM09 1.76e-69 17 773 71 795
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
T2KPJ7 2.18e-33 56 722 107 754
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P77989 2.34e-28 56 401 60 411
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
Q56307 5.88e-26 55 376 113 444
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001380_03011.