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CAZyme Information: MGYG000001381_01104

You are here: Home > Sequence: MGYG000001381_01104

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neisseria macacae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Neisseriaceae; Neisseria; Neisseria macacae
CAZyme ID MGYG000001381_01104
CAZy Family GT104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
383 MGYG000001381_2|CGC3 44383.39 5.5288
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001381 2684306 Isolate not provided not provided
Gene Location Start: 306113;  End: 307264  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT104 8 383 1.7e-170 0.9868073878627969

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4394 EarP 0.0 8 381 2 370
Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis].
TIGR03837 EarP 3.52e-158 11 376 3 370
Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P.
pfam10093 DUF2331 1.00e-148 11 376 3 372
Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVR78724.1 6.76e-293 1 383 1 383
QMT39025.1 3.08e-289 1 383 1 383
QTM23816.1 8.13e-285 1 383 1 383
SQF83436.1 9.49e-284 1 383 1 383
QPT38728.1 9.49e-284 1 383 1 383

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WXI_A 6.92e-278 1 383 1 382
EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76]
5XVR_A 4.32e-277 1 383 3 384
EarPbound with dTDP-rhamnose (co-crystal) [Neisseria meningitidis H44/76],5XVR_B EarP bound with dTDP-rhamnose (co-crystal) [Neisseria meningitidis H44/76]
7COX_A 3.84e-275 1 383 1 382
ChainA, Elongation factor P maturation arginine rhamnosyltransferase EarP [Neisseria meningitidis],7COX_F Chain F, Elongation factor P maturation arginine rhamnosyltransferase EarP [Neisseria meningitidis]
5NV8_A 6.14e-64 11 356 20 375
Structuralbasis for EarP-mediated arginine glycosylation of translation elongation factor EF-P [Pseudomonas putida KT2440]
6J7M_A 9.85e-64 11 375 25 390
Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E6MVV9 3.79e-277 1 383 1 382
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1
A0A0T7AQA7 9.56e-271 1 383 1 382
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1
Q88LS1 2.38e-63 11 356 7 362
Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1
Q9HZZ1 3.26e-63 11 375 6 371
Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1
Q8EEP8 2.25e-57 1 378 1 394
Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001381_01104.