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CAZyme Information: MGYG000001384_03246
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ralstonia pickettii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia pickettii | |||||||||||
| CAZyme ID | MGYG000001384_03246 | |||||||||||
| CAZy Family | CE11 | |||||||||||
| CAZyme Description | UDP-3-O-acyl-N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 129399; End: 130292 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 10 | 284 | 1.8e-77 | 0.992619926199262 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13187 | PRK13187 | 5.49e-172 | 1 | 297 | 1 | 304 | UDP-3-O-acyl N-acetylglycosamine deacetylase. |
| pfam03331 | LpxC | 1.15e-91 | 10 | 285 | 1 | 271 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| PRK13186 | lpxC | 1.88e-75 | 9 | 292 | 3 | 281 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| COG0774 | LpxC | 1.40e-69 | 10 | 292 | 4 | 284 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| TIGR00325 | lpxC | 2.08e-49 | 10 | 292 | 3 | 280 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQK35408.1 | 2.89e-221 | 1 | 297 | 1 | 297 |
| ANH72201.1 | 1.73e-195 | 2 | 295 | 3 | 296 |
| AIO50267.1 | 5.35e-143 | 1 | 293 | 1 | 300 |
| ARF86429.1 | 5.35e-143 | 1 | 293 | 1 | 300 |
| QUN55270.1 | 5.35e-143 | 1 | 293 | 1 | 300 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3NZK_A | 8.42e-43 | 10 | 292 | 9 | 289 | Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica] |
| 4MDT_A | 3.98e-42 | 10 | 292 | 4 | 284 | Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli] |
| 3P3G_A | 4.95e-42 | 10 | 292 | 4 | 284 | CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034] |
| 4MQY_A | 5.59e-42 | 10 | 292 | 4 | 284 | CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli] |
| 5U39_A | 4.72e-41 | 5 | 291 | 1 | 284 | Pseudomonasaeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B6ELH0 | 2.03e-46 | 10 | 292 | 4 | 284 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=lpxC PE=3 SV=1 |
| Q1D2K0 | 3.59e-46 | 9 | 291 | 7 | 284 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxC PE=3 SV=1 |
| C3LQU1 | 4.02e-46 | 10 | 293 | 4 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=lpxC PE=3 SV=1 |
| Q9KPH2 | 4.02e-46 | 10 | 293 | 4 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=lpxC PE=3 SV=1 |
| A5F5P3 | 4.02e-46 | 10 | 293 | 4 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lpxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000050 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |