You are browsing environment: HUMAN GUT

CAZyme Information: MGYG000001384_03700

You are here: Home > Sequence: MGYG000001384_03700

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ralstonia pickettii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia pickettii
CAZyme ID MGYG000001384_03700
CAZy Family GH166
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
769 MGYG000001384_3|CGC7 85376.07 6.7781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001384 5243975 Isolate not provided not provided
Gene Location Start: 610022;  End: 612331  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001384_03700.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH166 84 306 7e-88 0.9955357142857143

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3868 COG3868 9.25e-109 34 375 1 306
Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism].
cd10922 CE4_PelA_like_C 1.29e-105 533 767 1 224
C-terminal Putative NodB-like catalytic domain of PelA-like uncharacterized hypothetical proteins found in bacteria. This family is represented by a protein PelA of unknown function that is encoded by a gene in the pelA-G gene cluster for pellicle production and biofilm formation in Pseudomonas aeruginosa. PelA and most of the family members contain a domain of unknown function, DUF297, in the N-terminus and a C-terminal domain that shows high sequence similarity to the catalytic domain of the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.
pfam03537 Glyco_hydro_114 3.07e-21 75 306 12 219
Glycoside-hydrolase family GH114. This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases.
COG2342 COG2342 2.76e-13 83 307 44 285
Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism].
cd10585 CE4_SF 1.05e-05 537 625 1 80
Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily. The carbohydrate esterase 4 (CE4) superfamily mainly includes chitin deacetylases (EC, bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC, which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan, respectively. Members in this superfamily contain a NodB homology domain that adopts a deformed (beta/alpha)8 barrel fold, which encompasses a mononuclear metalloenzyme employing a conserved His-His-Asp zinc-binding triad, closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. The NodB homology domain of CE4 superfamily is remotely related to the 7-stranded beta/alpha barrel catalytic domain of the superfamily consisting of family 38 glycoside hydrolases (GH38), family 57 heat stable retaining glycoside hydrolases (GH57), lactam utilization protein LamB/YcsF family proteins, and YdjC-family proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQK35866.1 0.0 1 767 1 767
ANJ73222.1 0.0 36 767 1 729
ANH72539.1 0.0 39 767 1 726
QIF08030.1 0.0 1 767 1 762
ATG21321.1 0.0 24 767 3 741

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5TCB_A 5.06e-53 66 318 26 278
Structureof the glycoside hydrolase domain of PelA from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5TSY_A 3.50e-52 66 318 26 278
Structureof the glycoside hydrolase domain of PelA variant E218A from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

0.324745 0.631943 0.037717 0.003781 0.001186 0.000619

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001384_03700.