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CAZyme Information: MGYG000001384_04421
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ralstonia pickettii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia pickettii | |||||||||||
| CAZyme ID | MGYG000001384_04421 | |||||||||||
| CAZy Family | GH171 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 202469; End: 204781 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH171 | 420 | 770 | 6.1e-116 | 0.9971830985915493 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07075 | DUF1343 | 3.41e-148 | 421 | 770 | 1 | 362 | Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown. |
| COG3876 | YbbC | 4.82e-98 | 400 | 770 | 26 | 409 | Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown]. |
| pfam00144 | Beta-lactamase | 3.64e-68 | 25 | 362 | 1 | 327 | Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. |
| COG1680 | AmpC | 2.29e-52 | 30 | 352 | 45 | 372 | CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]. |
| PRK03642 | PRK03642 | 7.28e-45 | 22 | 343 | 40 | 395 | putative periplasmic esterase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AIS99137.1 | 0.0 | 15 | 770 | 21 | 776 |
| AHI76709.1 | 0.0 | 15 | 770 | 21 | 776 |
| QRA13692.1 | 0.0 | 15 | 770 | 35 | 790 |
| AIP29391.1 | 0.0 | 15 | 770 | 21 | 776 |
| AJY00831.1 | 0.0 | 15 | 770 | 21 | 776 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4K05_A | 6.41e-57 | 400 | 679 | 13 | 298 | Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343] |
| 4JJA_A | 6.80e-40 | 412 | 770 | 17 | 368 | Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343] |
| 4IVK_A | 3.77e-24 | 58 | 349 | 80 | 411 | Crystalstructure of a fammily VIII carboxylesterase in a complex with cephalothin. [uncultured bacterium] |
| 4IVI_A | 1.79e-19 | 58 | 322 | 80 | 361 | Crystalstructure of a family VIII carboxylesterase. [uncultured bacterium] |
| 1CI8_A | 2.15e-19 | 25 | 359 | 22 | 389 | ESTERASEESTB FROM BURKHOLDERIA GLADIOLI: AN ESTERASE WITH (BETA)-LACTAMASE FOLD. [Burkholderia gladioli],1CI8_B ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI: AN ESTERASE WITH (BETA)-LACTAMASE FOLD. [Burkholderia gladioli],1CI9_A DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI [Burkholderia gladioli],1CI9_B DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI [Burkholderia gladioli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40407 | 1.12e-74 | 400 | 770 | 37 | 414 | Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1 |
| P77619 | 1.35e-33 | 69 | 343 | 93 | 395 | Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2 |
| B4TR50 | 1.08e-32 | 61 | 343 | 83 | 395 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=yfeW PE=3 SV=1 |
| A9N307 | 1.45e-32 | 61 | 343 | 83 | 395 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) OX=1016998 GN=yfeW PE=3 SV=1 |
| C0PZ64 | 1.45e-32 | 61 | 343 | 83 | 395 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=yfeW PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000042 | 0.000008 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |