Species | Alistipes_A indistinctus | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A indistinctus | |||||||||||
CAZyme ID | MGYG000001385_00226 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 273937; End: 275430 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 49 | 395 | 1.2e-60 | 0.9353846153846154 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 2.07e-56 | 27 | 313 | 85 | 399 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 9.16e-10 | 63 | 284 | 12 | 205 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02793 | PLN02793 | 2.02e-09 | 21 | 285 | 49 | 339 | Probable polygalacturonase |
PLN03010 | PLN03010 | 9.61e-09 | 20 | 318 | 42 | 342 | polygalacturonase |
PLN03003 | PLN03003 | 1.02e-08 | 1 | 317 | 2 | 324 | Probable polygalacturonase At3g15720 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
BCG53462.1 | 0.0 | 1 | 497 | 1 | 497 |
QUT49882.1 | 4.75e-281 | 1 | 494 | 1 | 492 |
AHF16111.1 | 9.14e-265 | 5 | 492 | 4 | 490 |
SCM56503.1 | 3.43e-258 | 17 | 494 | 16 | 492 |
BBD44718.1 | 6.22e-254 | 17 | 494 | 16 | 492 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4MXN_A | 9.36e-45 | 23 | 253 | 20 | 236 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
5OLP_A | 1.16e-33 | 23 | 388 | 43 | 447 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
3JUR_A | 1.47e-23 | 19 | 342 | 22 | 383 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
2UVE_A | 1.92e-21 | 27 | 237 | 159 | 409 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P15922 | 1.38e-21 | 23 | 387 | 150 | 578 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
A7PZL3 | 3.05e-16 | 12 | 430 | 50 | 470 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P35338 | 1.52e-10 | 25 | 400 | 41 | 391 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
P26216 | 2.68e-10 | 25 | 400 | 41 | 391 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
B8NX60 | 2.92e-10 | 114 | 394 | 141 | 412 | Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxB PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000281 | 0.998825 | 0.000337 | 0.000177 | 0.000177 | 0.000165 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.