CAZyme Information: MGYG000001385_01267

Basic Information

• Species: Alistipes_A indistinctus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A indistinctus
• CAZyme ID: MGYG000001385_01267
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
583		64716.04	6.4559

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001385	2850981	Isolate	not provided	not provided

• Gene Location: Start: 1581281; End: 1583032 Strand: +

Full Sequence      

MKPILLSLLLLFAVPVCAALPPVFPAEAVEKSQADLRTTTYLSPVRVMWIQNEELVEGAD
HLLAKGKGQMINAPYPHCVMTSREGRRPSLLLDFGREIQGGVQIVTAGITGHKPARVRVR
LGESASEAMCEITPESGATNDHAMRDYVMYLPWYGVSETGNSGFRFVRIDLLEDDVVVPV
QEIRAKFTYRDIPYLGSFRSSDTRLDSIWMTGAYTVHLNMQDYLWDGIKRDRLVWMGDAH
PELCTMLAVFGDNEVMKKTLDQARDQTPLPGWMNGICAYSLWWALIHHDYYMYTGDLDYL
REQQSYMNALFDMAAGMVDGQGHEHMTGAGRFLDWPTSRDRKAVDAGLHALLLMTFDAGI
RMAGALGDTALAAKCSSAAERMRKVTPDYATTKQSAALAALAGLVPARQVNEEVLKKGGV
EGFSTFYGYYMLQAKAKAGDYAGAIDNIDTYWGAMLDLGATTFWEDFDIKWLDNAARIDE
LVPEGKVDVHRSYGDFCYKGFRHSFCHGWASGPTAWLSEHVLGISIVEPGCKAVRVRPHL
GGLQWAEGTFPTPYGVISVRHERQGDGTVKSKISAPKGVKIVR

Enzyme Prediction     

No EC number prediction in MGYG000001385_01267.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	89	580	4.8e-107	0.9742063492063492

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	3.09e-17	196	521	4	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.74e-08	523	580	1	58	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCG54529.1	0.0	1	583	1	583
QGA24783.1	7.18e-303	20	583	6	569
BCI64228.1	2.31e-294	20	583	34	596
QUT48045.1	2.16e-248	24	583	11	583
QRR03982.1	1.76e-246	8	583	5	579

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	3.80e-47	76	578	180	690	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4XHC_A	4.51e-13	89	522	94	543	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000563	0.998551	0.000375	0.000187	0.000153	0.000154

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001385_01267.