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CAZyme Information: MGYG000001386_02573

You are here: Home > Sequence: MGYG000001386_02573

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterocloster clostridioformis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster clostridioformis
CAZyme ID MGYG000001386_02573
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
522 MGYG000001386_3|CGC3 58187.43 5.6773
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001386 5455983 Isolate not provided not provided
Gene Location Start: 149034;  End: 150602  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001386_02573.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 107 468 1.3e-70 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.13e-102 50 514 49 527
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 5.21e-33 82 400 53 342
Probable polygalacturonase
PLN02218 PLN02218 1.93e-28 70 402 59 359
polygalacturonase ADPG
PLN02188 PLN02188 2.06e-28 81 399 36 326
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 4.63e-27 184 393 48 246
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIX91771.1 0.0 1 522 1 522
QQR03573.1 0.0 1 522 1 522
ANU47529.1 0.0 1 522 1 522
QJU22750.1 0.0 1 522 1 522
QRP36832.1 0.0 1 522 1 522

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 4.68e-32 82 369 28 335
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 7.63e-27 84 369 47 344
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 3.69e-23 98 397 26 314
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
2UVE_A 1.23e-18 47 411 116 514
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 4.95e-59 216 448 15 247
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 8.59e-47 86 469 67 432
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 9.59e-27 66 417 11 318
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q8RY29 5.16e-25 81 431 67 378
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q9FY19 4.36e-24 80 397 58 347
Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001386_02573.