CAZyme Information: MGYG000001391_00320

Basic Information

• Species: Coprobacter fastidiosus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter fastidiosus
• CAZyme ID: MGYG000001391_00320
• CAZy Family: GH2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
933	MGYG000001391_1|CGC3	105022.47	6.1941

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001391	3843461	Isolate	not provided	not provided

• Gene Location: Start: 331442; End: 334243 Strand: +

Full Sequence      

MKRNILFLLLILFGLIPEGFSQEYVLDLSGTWQFAMDSKDVGEQECWFERSLEDVILLPG
TTDLAGKGIPNELSPALEKPQMLHLTRRHSYVGPAWYSREIEIPASWKGRNVSLYLERVM
WQSKVWIDGVALEGVQESLTTPHRFDLPSDIRPGKHRLTIRIDNRKQYDISVKDLAHAYT
NDTQIMWNGVLGRLELRAENQISVEDVQLYPNVSQKKVRCVVTVSNFGKKEKQGTLSFNP
KILTDGRALSSQLLTTSFRPGKNTITYDYDMGENTVLWNEFSPVCYQMDVILTQGKKTSA
FSARFGMRNLSTSGSVLMNNGDRIYLRGTLECCIFPLTGTPPTDKEGWNKVFSVAKAYGL
NHLRFHSWCPPQAAFEVADDMGFYLQVELPLWSLTVGKDTTTNRFLHEEADRILKEYGNH
PSFCLMSVGNELQPDFDFLNNLRSYMKSKDNRHLYTTTTFTFEKGHGDWPETGDDFFVTQ
WTKKGWVRGQGIFNDESPCFNKDYTSAVDGMNVPLISHEIGQYAVYPNLKEIEKYKGVLD
PLNFKAVRADLQEKGLLSKADDYLNASGKLAAILYKEEIERALKTPGFSGFQLLDLHDFP
GQGTALVGLLDAFWDSKGIVAAEDFRNFCSPVVPLTRFPKAVYTNNELFEATVEIANYAA
SDIDNKKILWNLFGPGRKSVASGYFDAAHIEKGKNSVIGKISASLNQVTVATCLTLEVAV
AETPYKNSWSVWVYPENVAINAGDVCVTDNLEKALSELSKGRKVLLSPPVGALKGIEGKF
VPVFWSPIHFPKQAGSMGILCDSGHSALSDFPTENHTDWQWWHLLKNSKTLVVDSIAPVS
AIVEHVDNFANNRRLLSVFEATCNGGKLLFSSMDILSEKNQKYPEIRQLLYSLLNYMNSE
TFKPCSELPKEDLNKLVDNEIHEVKSSSATSIY

Enzyme Prediction     

No EC number prediction in MGYG000001391_00320.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH2	22	694	4.4e-59	0.6861702127659575

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10150	PRK10150	6.82e-19	25	328	12	296	beta-D-glucuronidase; Provisional
COG3250	LacZ	3.01e-14	25	465	12	442	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837	Glyco_hydro_2_N	4.47e-12	28	189	4	156	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam00703	Glyco_hydro_2	6.29e-04	202	308	1	106	Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ASM65962.1	0.0	7	933	9	934
QRP59794.1	0.0	7	933	4	929
QQT79911.1	0.0	7	933	4	929
QUU08147.1	0.0	7	933	4	929
QKH84659.1	0.0	3	918	2	914

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6U7J_A	4.71e-13	15	521	11	508	UnculturedClostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_B Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_C Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_D Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.]
6D8K_A	2.48e-12	91	455	96	440	Bacteroidesmultiple species beta-glucuronidase [Bacteroides ovatus],6D8K_B Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_C Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_D Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus]
6LEG_A	1.86e-09	28	521	16	507	ChainA, Beta-D-glucuronidase [Escherichia coli],6LEG_B Chain B, Beta-D-glucuronidase [Escherichia coli],6LEG_C Chain C, Beta-D-glucuronidase [Escherichia coli],6LEG_D Chain D, Beta-D-glucuronidase [Escherichia coli],6LEL_A Chain A, Beta-D-glucuronidase [Escherichia coli],6LEL_B Chain B, Beta-D-glucuronidase [Escherichia coli]
3K4A_A	1.86e-09	28	521	17	508	Crystalstructure of selenomethionine substituted E. coli beta-glucuronidase [Escherichia coli K-12],3K4A_B Crystal structure of selenomethionine substituted E. coli beta-glucuronidase [Escherichia coli K-12]
6LEM_B	1.86e-09	28	521	13	504	ChainB, Beta-D-glucuronidase [Escherichia coli]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P05804	1.02e-08	28	521	15	506	Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
Q48727	6.83e-06	28	431	40	431	Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000228	0.999107	0.000186	0.000153	0.000148	0.000146

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001391_00320.