CAZyme Information: MGYG000001391_00377

Basic Information

• Species: Coprobacter fastidiosus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter fastidiosus
• CAZyme ID: MGYG000001391_00377
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1283	MGYG000001391_1|CGC4	140974.61	6.4885

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001391	3843461	Isolate	not provided	not provided

• Gene Location: Start: 419211; End: 423062 Strand: +

Full Sequence      

MKKTWRIVLPALLVGSFISFADTKDKREINDKAVTEEICPCEMEGMDPEEAYNRSMANAG
VSQQVSKETPKYLNPNIPIEERIDDLLPRLTLEEKVIQLSDSWGSKGIARLKIPAMLKTE
GLHGQSYATGSTIFPHGINMGSTFDTELIQEVGKATAIEAKAANLRVSWSPVLDVARDAR
WGRVEETYGEDPYLVGRIGVAWIKGFQGEHMFACPKHFAGHGQPVGGRDSHDYGLSDRVM
RNIHLAPFRDVIKEANAFGVMAAYGLWNGVPDNGSKELLQKILREEWGFEGFVVSDCSGP
ENIQRKQSVVGTMEEAAAMAVRAGVDIECGSAYKKALASAVKKGIIKESELDANLRRVFR
AKMRLGLFDRPSIENMVWNKLPEYDTPEHRALARKVAVKSTVLLKNENNLLPLDKNIKTI
AVIGPNADQGQTGDYSAKYAPGQIISVLEGVKNHVSPSTKVLYAQGCTQLDMDTTGFAEA
VNIAKQADAVILVVGDNSNRHENGNKKSTTGENVDGATLEIPGVQRQLIKAVEATGKPVV
LVLVNGKPFTLTWEDENIESILETWYPGEEGGNATADIIFGDENPSGRLPISFPRHPGQL
PLWYNYETSGRNYDYYDMPFTPLYRFGHGLSYTTFRYSNLKATTKSGDPGFVTVSVDIEN
TGKRPGEEVAQLYITDLVASVNTAVIDLKGFKRVFLKPGEKKTVTFELNPYLLSLLNPDM
KRVLEAGKFRMHVGGVCPEPPKGSTEHKQKIGFKDPSQGISGEFTVDKDYKADFEYTVSA
PKSVKGGESFKVVVKMKNSGNLLDIADVKLFGNSFLDDRRAEIEAGETKEMVFDVQMYAS
GNQTLTVILDDQIKSVPLKVSKVPAKLVLEGSSINMTEKGEMVYVAEARNVGSEPFNKSL
DVKVEGVTVASQPLRLDAGASQRVEIKYAFPRSGTFRVKVGTEAEQQLIVPGGIGLALQD
PLAYITFEGATDKDVKNEITGKMLPIQGKAQIIDGKNGKGFKKDKKETFVDAGGMDLYRK
PFTLAAWVYLNQMDNGQAMFFGGQAPMGADVDVTGTRLAAGIFQEKTILSYENSDVRGNN
KLQSGKWIHYVYTYNPEKEEGAIYIDGRLDKKAFQKPFAGPLERIAGSQRFSSGKFIIDD
VLVARTTMDEKAVKELYTNGVEAMRKAQKVTDWRPMDSAVEKMKAWAELNAGGKIQVFVE
VADNSGKVIDSKSVQLKSGENEYSLAGLKKGDKVRLRIDLSSTAWDGVPALQTVVLEGAS
PIRWSTVEEWMKGSASNSLLIGL

Enzyme Prediction     

No EC number prediction in MGYG000001391_00377.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	107	329	4.1e-76	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	74	734	26	751	beta-glucosidase BglX.
PLN03080	PLN03080	1.78e-123	72	734	42	769	Probable beta-xylosidase; Provisional
COG1472	BglX	1.25e-89	80	461	20	397	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915	Glyco_hydro_3_C	8.12e-71	401	632	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933	Glyco_hydro_3	2.11e-68	110	361	63	316	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW89388.1	4.21e-235	71	833	165	929
AAO76887.1	4.21e-235	71	833	165	929
QQA09894.1	4.78e-235	71	833	169	933
QUT39633.1	4.78e-235	71	833	169	933
QGT74176.1	8.37e-235	71	833	165	929

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5Z87_A	6.77e-125	109	734	119	771	ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5YOT_A	1.07e-124	68	734	3	742	Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
5TF0_A	7.35e-124	109	735	79	738	CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
7EAP_A	7.70e-124	68	734	3	742	ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5XXL_A	1.81e-122	109	734	80	738	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KMH0	1.27e-149	74	734	28	707	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q56078	1.42e-132	74	746	63	763	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	7.91e-128	108	746	99	763	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH9	7.69e-111	63	749	20	756	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	5.19e-100	96	751	100	784	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.009823	0.936119	0.053096	0.000297	0.000313	0.000305

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001391_00377.