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CAZyme Information: MGYG000001391_03118

You are here: Home > Sequence: MGYG000001391_03118

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprobacter fastidiosus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter fastidiosus
CAZyme ID MGYG000001391_03118
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 MGYG000001391_9|CGC1 62689.97 7.8915
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001391 3843461 Isolate not provided not provided
Gene Location Start: 30021;  End: 31685  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001391_03118.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 252 539 9e-113 0.9861111111111112
CE12 28 236 1.9e-81 0.9904761904761905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01095 Pectinesterase 4.78e-98 251 542 1 298
Pectinesterase.
cd01821 Rhamnogalacturan_acetylesterase_like 1.16e-94 26 236 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 1.40e-88 254 532 9 289
pectinesterase
PLN02682 PLN02682 9.69e-87 242 530 61 352
pectinesterase family protein
PLN02432 PLN02432 4.29e-79 254 545 15 291
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP57044.1 2.72e-233 16 547 17 567
QQT77712.1 2.72e-233 16 547 17 567
QUU07655.1 7.76e-233 16 547 17 567
QUT45771.1 2.47e-231 1 547 1 576
QRQ48636.1 3.51e-231 1 547 1 576

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 7.64e-53 253 521 10 281
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.06e-50 253 521 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
2NSP_A 8.88e-34 250 549 4 341
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 2.57e-33 220 535 6 354
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 3.27e-33 254 518 13 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 5.35e-66 254 530 9 287
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 1.07e-62 256 545 90 380
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
P41510 1.56e-61 252 539 273 567
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q7Y201 1.98e-60 254 529 304 584
Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana OX=3702 GN=PME13 PE=2 SV=2
Q8L7Q7 4.26e-60 251 545 288 597
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.056429 0.921335 0.021319 0.000278 0.000273 0.000329

TMHMM  Annotations      download full data without filtering help

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