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CAZyme Information: MGYG000001391_03124

You are here: Home > Sequence: MGYG000001391_03124

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprobacter fastidiosus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter fastidiosus
CAZyme ID MGYG000001391_03124
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
325 MGYG000001391_9|CGC1 36906.5 6.1593
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001391 3843461 Isolate not provided not provided
Gene Location Start: 42045;  End: 43022  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001391_03124.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 27 307 1e-101 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 1.94e-77 25 310 5 299
pectinesterase
pfam01095 Pectinesterase 1.29e-73 27 310 2 298
Pectinesterase.
PLN02432 PLN02432 1.13e-70 26 313 12 293
putative pectinesterase
PLN02682 PLN02682 1.19e-67 15 313 57 368
pectinesterase family protein
COG4677 PemB 5.15e-64 24 301 81 396
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHM58501.1 3.25e-120 27 310 67 350
QDO69178.1 8.61e-115 6 301 9 305
QQY41711.1 1.52e-111 19 311 18 312
QQY38333.1 1.52e-111 19 311 18 312
ALK82867.1 1.52e-111 19 311 18 312

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 3.11e-46 28 320 6 312
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 1.12e-42 20 315 2 311
Pectinmethylesterase from Carrot [Daucus carota]
5C1C_A 9.90e-37 35 315 17 298
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 5.30e-36 35 315 17 298
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
4PMH_A 4.44e-24 39 280 50 365
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 1.05e-61 29 305 9 294
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9SIJ9 2.75e-54 29 313 53 333
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
Q8GXA1 6.72e-54 28 317 259 562
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q8VYZ3 2.73e-51 23 313 82 382
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
O23038 1.44e-49 29 313 93 389
Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000304 0.999048 0.000199 0.000148 0.000135 0.000128

TMHMM  Annotations      download full data without filtering help

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