CAZyme Information: MGYG000001394_01606

Basic Information

• Species: Yokenella regensburgei
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yokenella; Yokenella regensburgei
• CAZyme ID: MGYG000001394_01606
• CAZy Family: GH2
• CAZyme Description: Evolved beta-galactosidase subunit alpha

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1030	MGYG000001394_15|CGC3	117808.93	5.5959

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001394	4680112	Isolate	not provided	not provided

• Gene Location: Start: 199091; End: 202183 Strand: -

Full Sequence      

MNRWENIQLTHENRLPPRAYFFSYPSLTEARSFVRESSSLFQLLSGQWNFRFFDNPLRVP
EAFTTELMADWGTITVPGMWQMEGHGKLQYTDEGFPFPIDVPYVPTDNPTGAYQRTFTLG
EGWQGKQTLIKFDGVETYFEVYVNGRYIGFSKGSRLTAEFDISSAVHSGDNLLCVRVMQW
ADSTYVEDQDMWWSAGIFRDVYLVGKTLAHVEDFTVRTDFSDDYQSATLSCDVVLENLAP
QSAQLSLEYALYDGEQCLHEGHLPHLNVTDRHQAQFSMVVKHPRAWSAEDPYLYHLVMTV
KNAQGEILEVIPQRVGFRDIKVRNGLFYVNNRYLMLHGVNRHDNDHLKGRAVGMDRVERD
LVLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDLSRITDDPLW
EPVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMNLAAKALDDTRLIHYEEDRDA
EVVDIISTMYTRVPLMNEFGEYPHAKPRIICEYAHAMGNGPGGLTEYQNVFYRHDSIQGH
YVWEWCDHGIQAHDAEGREYYRFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA
PVKVSAGDLKRGELRIDNKLWFTTLDDYTLQVEVRAEGETLSSQRLKVPDLAPNSGRSLT
FARPMLDEREAFVNVRVTRDSRTRYSEANAEIAVYQFPLKARTANAAQWANPNATPLIVD
DKRLECVISGHNFRVVFSRVNGKLTSWQVNGEERITREPKINFFKPMIDNHKQEYEGLWQ
PNHLQIMQEHLRAFSVEAQEDAVLITTRSIIAPPVFDFGMRCTYRWRVAADGQLNVELSG
ERYGDYPHIIPCIGFTLGINGDFDQVAYYGRGPGENYPDSQQANIIDIWRSNVAAMFENY
PFPQNNGNRQHVRWASLTNRHGSGLLVIPQEPVHFSAWPYRAEDIHAAQHCNELMPAGDI
TLNIDHQLLGLGSNSWGSEVLDSWRVRFAPFRYGFTLLPLEGGSATSQALAGHRFGNGFF
STNSHSEADQ

Enzyme Prediction     

EC	3.2.1.23

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH2	31	886	2.6e-209	0.973404255319149

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3250	LacZ	0.0	30	888	1	808	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525	lacZ	0.0	4	997	17	1024	beta-galactosidase.
PRK10340	ebgA	0.0	1	1021	1	1021	cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836	Glyco_hydro_2_C	2.74e-140	320	604	1	302	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038	Bgal_small_N	1.27e-108	729	997	1	272	Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU90503.1	0.0	1	1030	1	1030
QKJ56524.1	0.0	1	1030	1	1030
AUW11274.1	0.0	1	1030	1	1030
QSW15176.1	0.0	1	1030	1	1030
QTN55946.1	0.0	1	1030	1	1030

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6S6Z_A	5.01e-199	4	997	4	979	Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A	5.15e-199	4	997	5	980	Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3OB8_A	8.76e-188	6	997	18	1029	Structureof the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_B Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_C Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_D Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OBA_A Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_B Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_C Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_D Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis]
1PX3_A	4.99e-175	4	993	16	1016	ChainA, beta-galactosidase [Escherichia coli],1PX3_B Chain B, beta-galactosidase [Escherichia coli],1PX3_C Chain C, beta-galactosidase [Escherichia coli],1PX3_D Chain D, beta-galactosidase [Escherichia coli],1PX4_A Chain A, beta-galactosidase [Escherichia coli],1PX4_B Chain B, beta-galactosidase [Escherichia coli],1PX4_C Chain C, beta-galactosidase [Escherichia coli],1PX4_D Chain D, beta-galactosidase [Escherichia coli]
1F4A_A	6.64e-175	4	993	14	1014	E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P06864	0.0	1	1030	1	1030	Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
O52847	2.05e-201	6	1000	23	1034	Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307	2.82e-198	4	997	5	980	Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
P00723	3.95e-187	6	997	11	1022	Beta-galactosidase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=LAC4 PE=1 SV=2
A5F5U6	1.06e-182	4	997	13	1016	Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000035	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001394_01606.