CAZyme Information: MGYG000001399_01095

Basic Information

• Species: Odoribacter laneus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter laneus
• CAZyme ID: MGYG000001399_01095
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
679	MGYG000001399_1|CGC11	79349.73	5.8605

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001399	3753471	Isolate	not provided	Asia

• Gene Location: Start: 1304798; End: 1306837 Strand: -

Full Sequence      

MMCLKFLSLLCMCVLSISMLGKENENTENYRNNRPPLFQKEYMELPLGSIKARGWLQEML
ERQRKGATSQMDVLYPEVMGKRNGWLGGDGDQWERGPYWIDGLLPLAYLLEDDELKAKVQ
PWIEWTLASQQKNGFFGPDRDYGPEPGLQRTNSKDWWPRMVVLKILQQYYSATGDERVIA
FMTQYFRYQWNTLPTVPLGNWTFWAEYRACDNLQAVYWLYNITGDAFLLDLGKLLHRQGY
DYLDMFLYRDDLTRINTIHCVNLAQGIKEPVIYYQQETDERYLQAVKKAFKDIRQFHGQP
QGMYGGDEALHGNNPTQGSELCSAVELMYSLEKMLEITADVQFADHLEKIAFNALPTQIT
DDFMARQYFQQPNQVMITRHKRNFDIDHGETDLVYGLLSGYPCCSSNMHQGWPKFTQNLW
YATADKGMAALVYSPSVVRAKVADGQTVEIREETFYPMDDRINFSFHLLENKKKGVTFPL
HLRIPAWCREARIEINGKLLKTAGGNRIEVITRHWKEEDQLTLVLPMQVTTDTWYENSIA
VERGPLVYALKIGEKWEKKKVEEHQEKFGKFYYEVYPTTDWNYGLIDFNPAETEKVFRVE
IDPEKQKLVFPWKLENAAIEIKVKARKIPQWQLYNETAGPQPYSRMYSVYPDALPDTEIT
LIPYGCTTLRITEFPIIRK

Enzyme Prediction     

No EC number prediction in MGYG000001399_01095.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	316	549	1.6e-33	0.4312977099236641

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	3.73e-56	98	549	62	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.51e-29	107	553	76	505	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ARS39276.1	6.61e-166	33	677	29	648
QNK64903.1	8.67e-164	18	677	10	645
QPH39723.1	1.68e-163	33	679	29	651
QDW25584.1	5.38e-162	33	677	31	650
QNR86060.1	1.01e-161	33	677	29	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	7.97e-18	99	550	82	561	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.20e-15	99	550	82	561	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A	1.70e-15	314	550	375	608	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
3WRE_A	2.33e-07	139	548	178	565	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	2.35e-07	139	548	178	565	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	1.28e-06	139	548	178	565	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000341	0.999019	0.000192	0.000140	0.000138	0.000135

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001399_01095.