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CAZyme Information: MGYG000001400_00374
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Erysipelatoclostridium ramosum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Erysipelatoclostridium; Erysipelatoclostridium ramosum | |||||||||||
| CAZyme ID | MGYG000001400_00374 | |||||||||||
| CAZy Family | CBM32 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 385842; End: 391109 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM32 | 1141 | 1262 | 2e-24 | 0.9435483870967742 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 2.45e-17 | 1140 | 1260 | 1 | 125 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| COG1196 | Smc | 3.28e-11 | 1416 | 1720 | 655 | 949 | Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]. |
| PRK03918 | PRK03918 | 3.39e-11 | 1421 | 1707 | 186 | 440 | DNA double-strand break repair ATPase Rad50. |
| COG1196 | Smc | 1.57e-10 | 1403 | 1696 | 722 | 1016 | Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]. |
| TIGR02168 | SMC_prok_B | 2.39e-10 | 1480 | 1700 | 194 | 411 | chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQY26898.1 | 0.0 | 1 | 1755 | 12 | 1766 |
| QPS14238.1 | 0.0 | 1 | 1755 | 12 | 1766 |
| QMW75427.1 | 0.0 | 1 | 1755 | 1 | 1755 |
| QQV06122.1 | 0.0 | 1 | 1755 | 12 | 1766 |
| QQY26901.1 | 1.33e-71 | 37 | 561 | 499 | 956 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2RV9_A | 1.75e-13 | 1132 | 1264 | 7 | 135 | Solutionstructure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
| 4ZXE_A | 1.80e-13 | 1132 | 1264 | 8 | 136 | X-raycrystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_B X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_C X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis] |
| 2RVA_A | 3.34e-13 | 1132 | 1264 | 7 | 136 | Solutionstructure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
| 4ZY9_A | 3.34e-13 | 1132 | 1264 | 8 | 136 | X-raycrystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZY9_B X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
| 4ZZ5_A | 3.42e-13 | 1132 | 1264 | 8 | 137 | X-raycrystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ5_B X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_A X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_B X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000356 | 0.998710 | 0.000341 | 0.000209 | 0.000181 | 0.000149 |
