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CAZyme Information: MGYG000001402_00549
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Coprobacillus cateniformis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Coprobacillus; Coprobacillus cateniformis | |||||||||||
| CAZyme ID | MGYG000001402_00549 | |||||||||||
| CAZy Family | CBM51 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 521411; End: 525037 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM51 | 40 | 187 | 1.7e-28 | 0.9850746268656716 |
| CBM32 | 869 | 980 | 3.5e-18 | 0.8064516129032258 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 5.25e-36 | 38 | 187 | 2 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 3.09e-18 | 40 | 187 | 6 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam00754 | F5_F8_type_C | 5.85e-15 | 868 | 981 | 4 | 119 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| cd14256 | Dockerin_I | 4.48e-11 | 1151 | 1207 | 2 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| cd14254 | Dockerin_II | 1.68e-09 | 1151 | 1206 | 1 | 53 | Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCL58565.1 | 0.0 | 35 | 1142 | 77 | 1194 |
| QZA21247.1 | 1.00e-203 | 35 | 1006 | 136 | 1104 |
| QUQ79223.1 | 1.00e-203 | 35 | 1006 | 136 | 1104 |
| SQF53247.1 | 1.00e-203 | 35 | 1006 | 136 | 1104 |
| ACG61564.1 | 1.20e-203 | 35 | 1006 | 143 | 1111 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JS4_A | 2.47e-13 | 40 | 187 | 613 | 752 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 2VMH_A | 3.83e-10 | 40 | 187 | 10 | 150 | Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
| 2VMG_A | 4.38e-10 | 40 | 187 | 16 | 156 | Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens] |
| 2VMI_A | 7.09e-10 | 40 | 187 | 10 | 150 | Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
| 2VNG_A | 3.24e-09 | 40 | 186 | 12 | 171 | Family51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens in complex with blood group A-trisaccharide ligand. [Clostridium perfringens],2VNG_B Family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens in complex with blood group A-trisaccharide ligand. [Clostridium perfringens],2VNO_A Family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens in complex with blood group B-trisaccharide ligand. [Clostridium perfringens],2VNO_B Family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens in complex with blood group B-trisaccharide ligand. [Clostridium perfringens],2VNR_A Family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens. [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6RUF5 | 2.56e-07 | 40 | 186 | 43 | 202 | Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1 |
| P29767 | 4.20e-06 | 875 | 997 | 66 | 185 | Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000348 | 0.999008 | 0.000175 | 0.000162 | 0.000141 | 0.000136 |
