CAZyme Information: MGYG000001402_02919

Basic Information

• Species: Coprobacillus cateniformis
• Lineage: Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Coprobacillus; Coprobacillus cateniformis
• CAZyme ID: MGYG000001402_02919
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2007		223093.83	4.6981

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001402	3861289	Isolate	not provided	not provided

• Gene Location: Start: 152386; End: 158409 Strand: +

Full Sequence      

MKKFGVGLLSAFLVITSTMIPVNAESRIETQVSEILSSMTLKQKVGQILQPDTRSITPQQ
VGEYYIGSILSGGGAQPEQGNTAQDWANRLDEYQKAAIDTFGIPLLYGVDAVHGNNNVKD
STIFPHNIGLGQANDVDLVKQIGRITAQEIRAIGATWAFTPTLGLPQNERWGRTYECFSE
TSDVASQLGSAYIEGLQGDLSQNHSIGTAKHYIGEGLTYNGTNQGDVNGQLFYSQLEELL
KPYRAAIASDVKSVMVSYNSIDNVKCHGNKDLITDILKGQLGFKGIVITDYNGVDQIEGN
LSYKQKLIKSINAGMDMIMIDGNEGDSPKWMIARNSIIEAVNEGHISMERLEDAVKRILT
VKCELNFIDNPSLAYADKTLLSQFGSQQHRTVAREAVRKSLTLLKNTETANGSTLMLDLK
KMKKIAVAGISADDIGIQCGGWTMTWQGSTGNITKGTTIYSGLREVAQNDQIIDYAANGY
FSDDDYEAAIVVVGERPYAESNGDRVARDLSLPSSDIETIERIHKNHPDLPIIAVLTTGR
PITIADQVDDLDAIVMAGLPGSEGAGVADVLLGDYDFHGHLTMTWPWYAQDIESKFTDQT
KVMFEYGRGLTKNQVTAISQTPPNNPTVINLAQTNGIIEAENYYTKHNSIILENNNTSIG
YFWQGYDISYKVIVPEQARYTLNLNAATENDNVKAAFDVYIDDVLSYSTSTLAKNTGGWA
KFEAIEMNDKISLPSGQHIIKFVSQTKDLNIDYFKFIKFDDQYIEPENPNQPSIGTGALI
KEDAVQVTMSSSEHSGDMSWYAGDQDIENRNAPKDPLDIRNPDTSDITTIVVDDNQKYQS
VLGMGTSIEESTVNNLMKMSVTTRKKFIKQLVDPQTGMGNTLFRITIGTADFTGRDFYTY
YDGTGTELNGNPDWDNSTGHGFSIQKDRDYGIIQVIKEIQQIAQECGVEKDLKFFASSWT
PPGWMKLPTSASSSYPNNGLLLKGGQLNDRYIQDLAKYYVRFIEEYKKEGIPLYAMTLQN
EPLLEINYPSCLITGGQEAKLAKAIKEELNKSTVLLTDEKDVKVWAFDHNFDGAEAYVSE
LFATQDGRDNVDGIAFHPYGGVPSTMGSLYEQYKNKYTMNLTERSVWGASGANDIISWFR
NGSESYNAWVTMLDSKIAPHQWVGTPDPTMFVQDANHREKYWCTPEVYLIGQFTKYVRPG
YERILSTNGNTSTVTNVAFRDPKTGKIIMIVANSSGSAQNFKVISHGTQFNATLPAGNVA
TYIWEPVDGNQFKNITDDLTLNDAIIEGSGVINNGELGYIDSTTKVNYTVNVKQAGTYRV
EFDVAVGGEWHKDFPVVISQGNKELGRTHARRYVYWDNAEWSTYSTIQTYITLSETGLQN
ITLSFPEAGINFKDVRFIPAREIQSLPGKLDTTNYFNKSGCVLESENFGFIDRDYYLDYK
VNVLKAGDYDFDFEVATSQNNSGVWIDKIDMNNQVSNLGEIDFTNTGGTNLYTHQIKRLH
LDEGHYTMRIKFKAGETNFKGVVIGQAMSLQSDELIERQLHGHVINVHLIGGSFALNLTK
NAWHLNFPKGVDYEVQRIDDTNAKIVLQGEIEQDFDNDLSILLKVDASEFGGIVGTSLED
YILIKAIDDIETLTSMSEIPYHQDTFNMSIQGGTFKEDVIHHVTLAGEITQYVTIQKVTK
VSSRLLSITLQWKPMYNDCKGTIIITPDGYSDGVLSLEKELIFKQTDQLPPTIPVGNNNP
VDLTESLAYRHKGSLVNQPAKGNYIDFFLDIQTAGKYTIYYDITNTEAVANGLKISGGLG
LATDNLESISFHKFWGNELGYWHTLDLKEGKQTLRFEMNNYNDGFKIDHIRIAKVQSAIE
VQGNTTIVVNQLIDGSKTKGWGIETKNGIANIGCSESGAYQDYHINVKKDGYYQFSINAA
YNGGSHANAILQLINNQTSYVKSTSQSVTELGKVQITQTGDWGNFVNSDKVLVKLSAGEQ
TIRIYDEGDGFNYRSFDLDYVKEFNEV

Enzyme Prediction     

No EC number prediction in MGYG000001402_02919.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	827	1264	1.2e-106	0.9904076738609112
GH3	97	319	2.4e-67	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	3.98e-67	40	361	1	316	Glycosyl hydrolase family 3 N terminal domain.
PRK15098	PRK15098	2.82e-63	1	586	1	600	beta-glucosidase BglX.
pfam01915	Glyco_hydro_3_C	3.23e-37	401	611	1	215	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
COG5520	XynC	2.83e-35	830	1265	36	429	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
PLN03080	PLN03080	1.03e-31	118	585	108	588	Probable beta-xylosidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQV06088.1	0.0	1	2003	1	2008
QPS14204.1	0.0	1	2003	1	2008
QMW75461.1	0.0	1	2003	1	2008
QQY26973.1	0.0	1	2003	1	2008
BCL58477.1	0.0	1	1998	2	2012

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M6G_A	7.50e-139	31	611	50	613	Crystalstructure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
6JGC_A	9.41e-130	23	613	11	604	Crystalstructure of barley exohydrolaseI W286Y mutant in complex with glucose. [Hordeum vulgare subsp. vulgare],6JGD_A Crystal structure of barley exohydrolaseI W286Y mutant in complex with methyl 6-thio-beta-gentiobioside [Hordeum vulgare subsp. vulgare]
6JG7_A	3.30e-129	23	613	11	604	Crystalstructure of barley exohydrolaseI W286F in complex with methyl 2-thio-beta-sophoroside [Hordeum vulgare subsp. vulgare],6JGA_A Crystal structure of barley exohydrolaseI W286F in complex with 4'-nitrophenyl thiolaminaribioside [Hordeum vulgare subsp. vulgare],6JGB_A Crystal structure of barley exohydrolaseI W286F mutant in complex with methyl 6-thio-beta-gentiobioside [Hordeum vulgare subsp. vulgare]
1LQ2_A	3.65e-129	23	613	7	600	Crystalstructure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with gluco-phenylimidazole [Hordeum vulgare],1X38_A crystal structure of barley beta-D-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole [Hordeum vulgare],1X39_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole [Hordeum vulgare]
1EX1_A	4.00e-129	23	613	7	600	Beta-d-glucanExohydrolase From Barley [Hordeum vulgare],1IEQ_A Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 [Hordeum vulgare],1IEV_A Crystal Structure Of Barley Beta-d-glucan Glucohydrolase Isoenzyme Exo1 In Complex With Cyclohexitol [Hordeum vulgare],1IEW_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with 2-deoxy-2-fluoro-alpha-D-glucoside [Hordeum vulgare],1IEX_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with 4I,4III,4V-S-trithiocellohexaose [Hordeum vulgare],1J8V_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme Exo1 in complex with 4'-nitrophenyl 3I-thiolaminaritrioside [Hordeum vulgare],3WLH_A Crystal Structure Analysis of Plant Exohydrolase [Hordeum vulgare subsp. vulgare],3WLJ_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with 3-deoxy-glucose [Hordeum vulgare subsp. vulgare],3WLK_X Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with 4-deoxy-glucose [Hordeum vulgare subsp. vulgare],3WLL_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with PEG400 [Hordeum vulgare subsp. vulgare],3WLM_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme exo1 in complex with octyl-O-glucoside [Hordeum vulgare subsp. vulgare],3WLN_A Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with octyl-S-glucoside [Hordeum vulgare subsp. vulgare],3WLP_A Crystal Structure Analysis of Plant Exohydrolase [Hordeum vulgare subsp. vulgare]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q23892	5.92e-66	22	611	70	698	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
A7LXU3	2.24e-63	28	586	35	617	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
P33363	1.57e-48	21	586	28	600	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q56078	5.01e-48	21	586	28	600	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0	5.46e-48	97	586	59	563	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000933	0.997908	0.000273	0.000313	0.000280	0.000259

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001402_02919.