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CAZyme Information: MGYG000001405_00038
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ferdinandcohnia timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae_L; Ferdinandcohnia; Ferdinandcohnia timonensis | |||||||||||
| CAZyme ID | MGYG000001405_00038 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 35576; End: 36682 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 8.14e-45 | 24 | 233 | 325 | 527 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK13914 | PRK13914 | 8.51e-44 | 1 | 366 | 1 | 480 | invasion associated endopeptidase. |
| PRK06347 | PRK06347 | 4.81e-40 | 29 | 229 | 405 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam00877 | NLPC_P60 | 4.26e-38 | 263 | 366 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK06347 | PRK06347 | 6.34e-30 | 94 | 237 | 321 | 457 | 1,4-beta-N-acetylmuramoylhydrolase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AST90927.1 | 7.24e-177 | 1 | 368 | 1 | 359 |
| AXI11208.1 | 5.74e-135 | 8 | 368 | 2 | 347 |
| QRZ18338.1 | 5.59e-127 | 1 | 368 | 1 | 354 |
| AVR00362.1 | 4.06e-126 | 1 | 368 | 1 | 361 |
| QGH32879.1 | 7.88e-126 | 1 | 368 | 1 | 360 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7CFL_A | 1.04e-18 | 252 | 366 | 15 | 136 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2K1G_A | 1.74e-17 | 250 | 366 | 2 | 122 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 4HPE_A | 1.64e-16 | 224 | 363 | 159 | 302 | ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630] |
| 4XCM_A | 8.33e-14 | 188 | 366 | 5 | 229 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 2MKX_A | 5.83e-13 | 186 | 233 | 5 | 52 | Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07532 | 1.79e-66 | 31 | 368 | 175 | 488 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 8.65e-62 | 30 | 368 | 88 | 414 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| P54421 | 1.13e-61 | 4 | 367 | 2 | 334 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q01835 | 3.57e-33 | 1 | 366 | 1 | 510 | Probable endopeptidase p60 OS=Listeria grayi OX=1641 GN=iap PE=3 SV=1 |
| Q49UX4 | 2.01e-30 | 3 | 233 | 2 | 197 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000224 | 0.999147 | 0.000165 | 0.000163 | 0.000148 | 0.000132 |