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CAZyme Information: MGYG000001407_01484

You are here: Home > Sequence: MGYG000001407_01484

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J senegalense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J senegalense
CAZyme ID MGYG000001407_01484
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
392 43385.07 6.4972
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001407 3871298 Isolate not provided not provided
Gene Location Start: 1591192;  End: 1592370  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001407_01484.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 235 373 2.8e-24 0.9453125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 3.34e-61 128 390 7 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 3.86e-21 225 370 5 135
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 2.53e-06 233 316 1 76
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
pfam13205 Big_5 4.63e-04 66 133 39 106
Bacterial Ig-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARC83197.1 8.52e-121 37 392 34 389
SNV63668.1 1.31e-55 125 392 235 491
ABK61760.1 1.14e-53 54 390 182 512
QPW55358.1 1.64e-51 147 390 272 510
AYF54026.1 1.64e-51 147 390 272 510

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 2.75e-39 144 390 1 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 3.14e-33 180 368 78 253
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 1.64e-32 180 368 48 223
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 8.88e-31 152 377 6 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 6.43e-30 152 377 6 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 4.66e-44 186 390 687 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q6GI31 2.95e-35 144 390 1014 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
Q99V41 3.98e-35 144 390 1005 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 3.98e-35 144 390 1005 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
P0C5Z8 3.99e-35 144 390 1012 1254
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000218 0.999145 0.000152 0.000180 0.000148 0.000135

TMHMM  Annotations      download full data without filtering help

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