logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001407_02630

You are here: Home > Sequence: MGYG000001407_02630

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J senegalense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J senegalense
CAZyme ID MGYG000001407_02630
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
358 MGYG000001407_3|CGC3 41381.16 6.1876
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001407 3871298 Isolate not provided not provided
Gene Location Start: 401091;  End: 402167  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001407_02630.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH170 4 355 4.3e-125 0.9914285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3589 COG3589 4.27e-140 1 358 1 359
Uncharacterized protein [Function unknown].
pfam19200 DUF871_N 2.30e-119 4 236 1 235
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
pfam05913 DUF871 4.89e-50 242 356 1 116
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARC85416.1 2.53e-177 1 355 1 358
QIB27836.1 3.27e-176 1 355 1 358
QRI53290.1 3.84e-165 1 355 1 359
AUM92867.1 1.10e-164 1 355 1 359
APH18546.1 1.10e-164 1 355 1 359

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1X7F_A 5.93e-115 4 353 29 381
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]
2P0O_A 3.42e-30 5 353 6 355
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001407_02630.