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CAZyme Information: MGYG000001407_03213

You are here: Home > Sequence: MGYG000001407_03213

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J senegalense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J senegalense
CAZyme ID MGYG000001407_03213
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
457 MGYG000001407_5|CGC1 51059.89 4.7272
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001407 3871298 Isolate not provided not provided
Gene Location Start: 134325;  End: 135698  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001407_03213.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.93e-14 341 402 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 3.80e-07 289 402 1 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 4.47e-05 318 404 103 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWZ49621.1 6.10e-187 1 454 1 443
VTQ95559.1 3.77e-185 5 420 4 419
QSW20651.1 7.43e-181 1 454 1 437
ASW42008.1 1.78e-180 1 448 1 438
AYE34395.1 3.59e-180 1 454 1 442

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001407_03213.