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CAZyme Information: MGYG000001415_00407

You are here: Home > Sequence: MGYG000001415_00407

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes communis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes communis
CAZyme ID MGYG000001415_00407
CAZy Family GT4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
387 MGYG000001415_1|CGC3 46114.23 7.775
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001415 3134723 Isolate not provided not provided
Gene Location Start: 453206;  End: 454369  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001415_00407.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd11579 Glyco_tran_WbsX 0.0 28 383 2 347
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases. Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
pfam14307 Glyco_tran_WbsX 0.0 29 378 1 312
Glycosyltransferase WbsX. Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.
COG3754 RgpF 1.75e-20 29 379 95 401
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
cd11573 GH99_GH71_like 6.75e-18 76 367 2 254
Glycoside hydrolase families 71, 99, and related domains. This superfamily of glycoside hydrolases contains families GH71 and GH99 (following the CAZY nomenclature), as well as other members with undefined function and specificity.
cd11578 GH99_GH71_like_1 1.48e-12 76 386 25 312
Uncharacterized glycoside hydrolase family 99-like domain. This family of putative glycoside hydrolases resembles glycosyl hydrolase families 71 and 99 (following the CAZY nomenclature) and may share a similar catalytic site and mechanism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QXE90908.1 2.12e-131 28 383 721 1073
QXM11006.1 2.12e-131 28 383 721 1073
QDR67330.1 2.90e-115 23 383 377 728
QJQ09209.1 4.25e-115 28 383 370 716
AJG15113.1 6.00e-115 28 383 370 716

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C7J1 8.06e-98 29 382 92 433
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1
B0RVK2 1.13e-97 29 382 92 433
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999994 0.000055 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001415_00407.