logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001416_00342

You are here: Home > Sequence: MGYG000001416_00342

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cellulomonas massiliensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Cellulomonadaceae; Cellulomonas; Cellulomonas massiliensis
CAZyme ID MGYG000001416_00342
CAZy Family GH16
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
490 51895.73 7.8863
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001416 3245988 Isolate not provided not provided
Gene Location Start: 376026;  End: 377498  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001416_00342.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 365 488 9.6e-31 0.6702127659574468
GH16 58 287 7.4e-18 0.9682539682539683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00652 Ricin_B_lectin 6.75e-26 367 487 4 126
Ricin-type beta-trefoil lectin domain.
NF035929 lectin_1 1.20e-24 374 489 721 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
cd00161 RICIN 1.27e-23 370 489 6 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
smart00458 RICIN 1.92e-23 369 490 2 118
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
cd00413 Glyco_hydrolase_16 1.23e-22 59 287 1 207
glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGZ39149.1 3.70e-138 42 459 25 424
ADB29204.1 3.68e-113 51 318 42 314
AGL20089.1 1.41e-108 28 328 7 306
QZD57928.1 1.43e-108 47 341 3 296
UAC01072.1 4.69e-108 44 403 33 357

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.947799 0.051038 0.000294 0.000172 0.000119 0.000608

TMHMM  Annotations      download full data without filtering help

start end
24 46